RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 PARD3Q8TEW0 1356 aa3.24□□□□□ -1.89
VAPA-208ENST00000584796 GAGE12JA6NER3 117 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 VSTM5A8MXK1 200 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 ERVV-2B6SEH9 535 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 ZSCAN9O15535 394 aaPredicted RBP3.23□□□□□ -1.89
VAPA-208ENST00000584796 DHHO43323 396 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 PPP6R2O75170 966 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 SBF1O95248 1867 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 KLKB1P03952 638 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 ACAA1P09110 424 aaPredicted RBP3.23□□□□□ -1.89
VAPA-208ENST00000584796 HOXC6P09630 235 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 GSTM5P46439 218 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 GAS1P54826 345 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 DSCR9P59020 149 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 CKAP5Q14008 2032 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 INO80DQ53TQ3 878 aaPredicted RBP3.23□□□□□ -1.89
VAPA-208ENST00000584796 DGKKQ5KSL6 1271 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 TTC39AQ5SRH9 613 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 PPP4R4Q6NUP7 873 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 PARM1Q6UWI2 310 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 C16orf89Q6UX73 402 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 RTL10Q7L3V2 364 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 PAQR4Q8N4S7 273 aaPredicted RBP3.23□□□□□ -1.89
VAPA-208ENST00000584796 NR4A3Q92570 626 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 LRRC46Q96FV0 321 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 URB1-AS1Q96HZ7 61 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 ZNF347Q96SE7 839 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 NUP62CLQ9H1M0 184 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 YTHDC2Q9H6S0 1430 aaKnown RBP3.23□□□□□ -1.89
VAPA-208ENST00000584796 HIF1ANQ9NWT6 349 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 MYO6Q9UM54 1294 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 PCDHGB6Q9Y5F9 930 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 SBNO1A3KN83 1393 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 LRPPRCP42704 1394 aaKnown RBP3.23□□□□□ -1.89
VAPA-208ENST00000584796 LTN1O94822 1766 aa3.23□□□□□ -1.89
VAPA-208ENST00000584796 COL5A2P05997 1499 aaPredicted RBP3.22□□□□□ -1.89
VAPA-208ENST00000584796 FRMPD2Q68DX3 1309 aaPredicted RBP3.22□□□□□ -1.89
VAPA-208ENST00000584796 ADGRB1O14514 1584 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 TNS2Q63HR2 1409 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 GXYLT2A0PJZ3 443 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 FOXO6A8MYZ6 492 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 CNTN5O94779 1100 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 PAPSS2O95340 614 aaPredicted RBP3.22□□□□□ -1.89
VAPA-208ENST00000584796 MYL4P12829 197 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 FGFR2P21802 821 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 TGM2P21980 687 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 CIITAP33076 1130 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 RASSF2P50749 326 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 RRP1P56182 461 aaKnown RBP3.22□□□□□ -1.89
VAPA-208ENST00000584796 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
VAPA-208ENST00000584796 ROR2Q01974 943 aaKnown RBP3.22□□□□□ -1.89
VAPA-208ENST00000584796 SLC5A9Q2M3M2 681 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 PLEKHG6Q3KR16 790 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 Q5PR19 223 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 MORC1Q86VD1 984 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 GPSM1Q86YR5 675 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 RNF152Q8N8N0 203 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 PRR26Q8N8Z3 221 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 EXD3Q8N9H8 876 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 ATP11CQ8NB49 1132 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 C7orf57Q8NEG2 295 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 MAGEB5Q9BZ81 275 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 IL21RQ9HBE5 538 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 PLAC1Q9HBJ0 212 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 KCNK9Q9NPC2 374 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 CORO2BQ9UQ03 480 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 SNX13Q9Y5W8 968 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 C5P01031 1676 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 UBR3Q6ZT12 1888 aa3.22□□□□□ -1.89
VAPA-208ENST00000584796 KIF13BQ9NQT8 1826 aa3.21□□□□□ -1.89
VAPA-208ENST00000584796 PDE4DIPQ5VU43 2346 aa3.21□□□□□ -1.89
VAPA-208ENST00000584796 PIK3C2GO75747 1445 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 SPATA31E1Q6ZUB1 1445 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 TULP4Q9NRJ4 1543 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 A0A087WYN8 130 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 TSPAN6O43657 245 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 EIF5BO60841 1220 aaKnown RBP3.21□□□□□ -1.9
VAPA-208ENST00000584796 IGKV3-20P01619 116 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 GABRB3P28472 473 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 CRYZQ08257 329 aaKnown RBP3.21□□□□□ -1.9
VAPA-208ENST00000584796 ZNF543Q08ER8 600 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 Q0VFX4 171 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 WASHC2DQ5SRD0 308 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 GFI1BQ5VTD9 330 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 RAP1GAP2Q684P5 730 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 HMBOX1Q6NT76 420 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 KDELC2Q7Z4H8 507 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 NR2C2APQ86WQ0 139 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 WFIKKN2Q8TEU8 576 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 NPIPB3Q92617 1050 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 KAT2AQ92830 837 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 SLITRK1Q96PX8 696 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 EIF3CQ99613 913 aaKnown RBP3.21□□□□□ -1.9
VAPA-208ENST00000584796 ABHD14AQ9BUJ0 271 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 APOL5Q9BWW9 433 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 DCLK3Q9C098 648 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 ISCUQ9H1K1 167 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 PRDM16Q9HAZ2 1276 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 MYO1AQ9UBC5 1043 aa3.21□□□□□ -1.9
VAPA-208ENST00000584796 SLC8A2Q9UPR5 921 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms