RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 UNKQ9C0B0 810 aaKnown RBP13.96□□□□□ -0.17
RNF43-205ENST00000581868 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
RNF43-205ENST00000581868 VCX3AQ9NNX9 186 aa13.96□□□□□ -0.17
RNF43-205ENST00000581868 OXSMQ9NWU1 459 aa13.96□□□□□ -0.17
RNF43-205ENST00000581868 CLIC5Q9NZA1 410 aa13.96□□□□□ -0.17
RNF43-205ENST00000581868 STK39Q9UEW8 545 aa13.96□□□□□ -0.17
RNF43-205ENST00000581868 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.17
RNF43-205ENST00000581868 PAPPA2Q9BXP8 1791 aa13.96□□□□□ -0.18
RNF43-205ENST00000581868 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 RGSL1A5PLK6 1076 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 CASQ2O14958 399 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 DCLK1O15075 740 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 DAB1O75553 588 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 XRCC1P18887 633 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 NAGLUP54802 743 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 DYNC1I2Q13409 638 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 FLOT2Q14254 428 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 GRM2Q14416 872 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 GRM3Q14832 879 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 ARL13AQ5H913 290 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 OGFRL1Q5TC84 451 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 NAT14Q8WUY8 206 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 NMD3Q96D46 503 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 LRGUKQ96M69 825 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 NPY6RQ99463 290 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 OSMRQ99650 979 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 ANLNQ9NQW6 1124 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 TLK1Q9UKI8 766 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 ZNF638Q14966 1978 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 MATN2O00339 956 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 HDAC3O15379 428 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 PABPC4LP0CB38 370 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 NMBRP28336 390 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 PMLP29590 882 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 RPL14P50914 215 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 CYLC2Q14093 348 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 CNGA3Q16281 694 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 C16orf89Q6UX73 402 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 PPTC7Q8NI37 304 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 WNT8BQ93098 351 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 SERPINI1Q99574 410 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 APBA2Q99767 749 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 MLPHQ9BV36 600 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 COPS7BQ9H9Q2 264 aaPredicted RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 ZDHHC2Q9UIJ5 367 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 STAP1Q9ULZ2 295 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 UBQLN1Q9UMX0 589 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 PCDHGB4Q9UN71 923 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 RUVBL2Q9Y230 463 aaKnown RBP13.95□□□□□ -0.18
RNF43-205ENST00000581868 TBC1D30Q9Y2I9 924 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 PCDHGB5Q9Y5G0 923 aa13.95□□□□□ -0.18
RNF43-205ENST00000581868 SMIM28A0A1B0GU29 152 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 TIMM44O43615 452 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 PEX1O43933 1283 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 HUS1O60921 280 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 FBXO21O94952 628 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 TFEBP19484 476 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 NFKB1P19838 968 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 CD68P34810 354 aaPredicted RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 TPI1P60174 286 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 MAMDC4Q6UXC1 1216 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 BNC2Q6ZN30 1099 aaPredicted RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 OSTM1Q86WC4 334 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 SPATA6LQ8N4H0 392 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 B3GALNT2Q8NCR0 500 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 BTBD9Q96Q07 612 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 MED10Q9BTT4 135 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 CASS4Q9NQ75 786 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 RAP2CQ9Y3L5 183 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 SNX10Q9Y5X0 201 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 PIRO00625 290 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 JUNP05412 331 aaKnown RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 TCN1P20061 433 aaPredicted RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 ADRA1BP35368 520 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 MAP3K7CLP57077 242 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 USP10Q14694 798 aaKnown RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 PDCD2Q16342 344 aaPredicted RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 CTU1Q7Z7A3 348 aaKnown RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 ZNF410Q86VK4 478 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 NPWQ8N729 165 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 KCTD4Q8WVF5 259 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 NCSTNQ92542 709 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 TSNARE1Q96NA8 513 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 NDNQ99608 321 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 DUSP16Q9BY84 665 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 MROH8Q9H579 483 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 C6orf203Q9P0P8 240 aaPredicted RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 COMMD3-BMI1R4GMX3 469 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 NRP1O14786 923 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 GRID2O43424 1007 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 CYP2B6P20813 491 aa13.94□□□□□ -0.18
RNF43-205ENST00000581868 IREB2P48200 963 aaKnown RBP13.94□□□□□ -0.18
RNF43-205ENST00000581868 TKTL1P51854 596 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms