RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 BRMS1LQ5PSV4 323 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 RABGAP1LQ5R372 815 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SLC23A3Q6PIS1 610 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 WDR59Q6PJI9 974 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SND1Q7KZF4 910 aaKnown RBP eCLIP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 ERMP1Q7Z2K6 904 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 FAM131BQ86XD5 332 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 MMAAQ8IVH4 418 aaKnown RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 CCDC117Q8IWD4 279 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 STK40Q8N2I9 435 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 EDEM2Q9BV94 578 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 NUP58Q9BVL2 599 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 C6orf106Q9H6K1 298 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SERGEFQ9UGK8 458 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 STAP1Q9ULZ2 295 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 CNOT1A5YKK6 2376 aaKnown RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 A0A0D9SEW6 157 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 A0A1B0GTH6 734 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 A0A1B0GVM2 712 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 TCRBV5S1A1TA0A578 114 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 TCAF2A6NFQ2 919 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 C2CD4BA6NLJ0 364 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 METTL12A8MUP2 240 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 E9PAM4 449 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 FAM72CH0Y354 149 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 RNF103O00237 685 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 PLK4O00444 970 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 LCE2BO14633 110 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 GIPC1O14908 333 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 MID1O15344 667 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 SNAP91O60641 907 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 MOCS3O95396 460 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 IGLV3-19P01714 112 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 ASLP04424 464 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 CFIP05156 583 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 KRT3P12035 628 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 ENGP17813 658 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 TNFAIP3P21580 790 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 GLDCP23378 1020 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 OXTRP30559 389 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 MAPK8P45983 427 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 LIMK1P53667 647 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 ST8SIA6P61647 398 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 RPL7AP62424 266 aaKnown RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 DHX9Q08211 1270 aaKnown RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 SLC12A1Q13621 1099 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 E2F5Q15329 346 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 DUOXA1Q1HG43 343 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 UAP1L1Q3KQV9 507 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 FAM72AQ5TYM5 149 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 PEAR1Q5VY43 1037 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 E4F1Q66K89 784 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 IL31Q6EBC2 164 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 ACAD10Q6JQN1 1059 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 FAM72DQ6L9T8 149 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 TFAP2DQ7Z6R9 452 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 FAM72BQ86X60 149 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 PHF13Q86YI8 300 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 CCDC185Q8N715 623 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 FRS2Q8WU20 508 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 CENPIQ92674 756 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 C1orf74Q96LT6 269 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 PSMB7Q99436 277 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 SYT11Q9BT88 431 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 NUSAP1Q9BXS6 441 aaKnown RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 MIR1-1HGQ9H1L0 117 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 RSPH9Q9H1X1 276 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 NEUROG2Q9H2A3 272 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 EIF2B4Q9UI10 523 aaKnown RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 TBC1D30Q9Y2I9 924 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 DAAM1Q9Y4D1 1078 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 ACTL7AQ9Y615 435 aa9.97□□□□□ -0.81
TOP3A-211ENST00000581536 TDRD6O60522 2096 aaKnown RBP9.97□□□□□ -0.81
TOP3A-211ENST00000581536 CACNA1EQ15878 2313 aa9.96□□□□□ -0.81
TOP3A-211ENST00000581536 IGLV3-10A0A075B6K4 115 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 TARSL2A2RTX5 802 aaKnown RBP9.96□□□□□ -0.82
TOP3A-211ENST00000581536 LRRC53A6NM62 1247 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 SIGLEC16A6NMB1 481 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 ESPNB1AK53 854 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 K7ERQ8 282 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 FOXD2O60548 495 aaPredicted RBP9.96□□□□□ -0.82
TOP3A-211ENST00000581536 CLDN11O75508 207 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 SERPINC1P01008 464 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 DNTTP04053 509 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 FERP16591 822 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 SLC8A1P32418 973 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 RDXP35241 583 aaKnown RBP9.96□□□□□ -0.82
TOP3A-211ENST00000581536 ADRA1BP35368 520 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 NSFP46459 744 aaKnown RBP9.96□□□□□ -0.82
TOP3A-211ENST00000581536 CDH4P55283 916 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 HDAC4P56524 1084 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 FANCCQ00597 558 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 OGDHQ02218 1023 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 DLG2Q15700 870 aa9.96□□□□□ -0.82
TOP3A-211ENST00000581536 FILIP1LQ4L180 1135 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms