RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	PBX3	P40426	434 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	GPR15	P49685	360 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	PAPOLA	P51003	745 aa	Known RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CDH4	P55283	916 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	OXCT1	P55809	520 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	RFTN1	Q14699	578 aa	Predicted RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	POLD3	Q15054	466 aa	Predicted RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	SLC14A2	Q15849	920 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	PIK3R6	Q5UE93	754 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	PDE12	Q6L8Q7	609 aa	Known RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CHST9	Q7L1S5	443 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	NLRP9	Q7RTR0	991 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	SETD3	Q86TU7	594 aa	Predicted RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	NLRP14	Q86W24	1093 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	ARHGAP12	Q8IWW6	846 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	TRIM42	Q8IWZ5	723 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CTAGE3P	Q8IX95	158 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	SRRM1	Q8IYB3	904 aa	Known RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	NPW	Q8N729	165 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	ANKS4B	Q8N8V4	417 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	ACMSD	Q8TDX5	336 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CLP1	Q92989	425 aa	Known RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	ATP2A3	Q93084	1043 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CHMP6	Q96FZ7	201 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CFAP36	Q96G28	342 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	AGAP3	Q96P47	875 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	PRKD2	Q9BZL6	878 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	SLC39A8	Q9C0K1	460 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	IQCG	Q9H095	443 aa	Known RBP	10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	SLC25A51	Q9H1U9	297 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	SP110	Q9HB58	689 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	CASS4	Q9NQ75	786 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	YIPF1	Q9Y548	306 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	IRAK3	Q9Y616	596 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	FAM169A	Q9Y6X4	670 aa		10.13	□□□□□ -0.79
TRIM16-222	ENST00000581224	COL4A6	Q14031	1691 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	FAM159B	A6NKW6	160 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	FGF18	O76093	207 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	USP1	O94782	785 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	LRG1	P02750	347 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	HMGA1	P17096	107 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	NFKB1	P19838	968 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	TACR2	P21452	398 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	CA4	P22748	312 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	OR1E1	P30953	314 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	POLD2	P49005	469 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	DEFB103A	P81534	67 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	MGAT5	Q09328	741 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	ZNF177	Q13360	481 aa	Predicted RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	KBTBD12	Q3ZCT8	623 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	TMEM240	Q5SV17	173 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	ADGRF1	Q5T601	910 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	FAXC	Q5TGI0	409 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	HHAT	Q5VTY9	493 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	KCTD11	Q693B1	232 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	FBXL22	Q6P050	247 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	UNC5A	Q6ZN44	842 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	MARK2	Q7KZI7	788 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	METTL3	Q86U44	580 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	ZNF683	Q8IZ20	524 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	TTC9B	Q8N6N2	239 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	LEMD2	Q8NC56	503 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	GPR152	Q8TDT2	470 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	DEPDC1B	Q8WUY9	529 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	DCAKD	Q8WVC6	231 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	MRPS31	Q92665	395 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	ZBTB9	Q96C00	473 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	LRCH3	Q96II8	777 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	CABS1	Q96KC9	395 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	MAGEB18	Q96M61	343 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	SAMD11	Q96NU1	681 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	CCT8L2	Q96SF2	557 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	PRMT1	Q99873	361 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	VN1R3	Q9BXE9	311 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	CRISPLD1	Q9H336	500 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	MRM3	Q9HC36	420 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	PPAN	Q9NQ55	473 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.12	□□□□□ -0.79	8e-9	■■■□□ 16.5
TRIM16-222	ENST00000581224	MOCS1	Q9NZB8	636 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	LSM7	Q9UK45	103 aa	Known RBP	10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	NUDT5	Q9UKK9	219 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	NEU3	Q9UQ49	428 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	MFHAS1	Q9Y4C4	1052 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	INSL5	Q9Y5Q6	135 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	SLC4A7	Q9Y6M7	1214 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	LAMA3	Q16787	3333 aa		10.12	□□□□□ -0.79
TRIM16-222	ENST00000581224	CXorf51A	A0A1B0GTR3	108 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	ILVBL	A1L0T0	632 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	SOX1	O00570	391 aa	Predicted RBP	10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	ADAM12	O43184	909 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	LILRB3	O75022	631 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	AVIL	O75366	819 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	SEC24A	O95486	1093 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	CXCL14	O95715	111 aa		10.11	□□□□□ -0.79
TRIM16-222	ENST00000581224	EPO	P01588	193 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms