RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 GRIA4P48058 902 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 MAPKAPK2P49137 400 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 NUMBP49757 651 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 NRG1Q02297 640 aaPredicted RBP20.63■□□□□ 0.89
SMG8-204ENST00000580498 SUZ12Q15022 739 aaKnown RBP20.63■□□□□ 0.89
SMG8-204ENST00000580498 C15orf59Q2T9L4 293 aaPredicted RBP20.63■□□□□ 0.89
SMG8-204ENST00000580498 CCDC14Q49A88 953 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 EFHC2Q5JST6 749 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 N4BP2L1Q5TBK1 243 aaPredicted RBP20.63■□□□□ 0.89
SMG8-204ENST00000580498 ACAD10Q6JQN1 1059 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 BNIPLQ7Z465 357 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 DEFB124Q8NES8 71 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D31Q96DN5 1066 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 ALG14Q96F25 216 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 VCPIP1Q96JH7 1222 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 PCDHB18PQ96TA0 734 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 EDEM3Q9BZQ6 932 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 OSBPL2Q9H1P3 480 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 NEUROG2Q9H2A3 272 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 KDM4CQ9H3R0 1056 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 FSCN3Q9NQT6 498 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 VPS51Q9UID3 782 aa20.63■□□□□ 0.89
SMG8-204ENST00000580498 CACNA1EQ15878 2313 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 NYNRINQ9P2P1 1898 aaKnown RBP20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3DA0A087WVF3 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3IA0A087WXS9 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3EA0A087X179 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3KA0A087X1G2 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 SYCE3A1L190 88 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3FA6NER0 549 aaPredicted RBP20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3LB9A6J9 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 CBX4O00257 560 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 MCF2LO15068 1137 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 PRNPP04156 253 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TPM3P06753 285 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3HP0C7X1 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 IRAK1P51617 712 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 GALCP54803 685 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 AIF1P55008 147 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 SEMA3BQ13214 749 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3GQ6DHY5 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3CQ6IPX1 549 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 SCYL2Q6P3W7 929 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 NCEH1Q6PIU2 408 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 Q6ZVU0 165 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 MON1BQ7L1V2 547 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 SLFN11Q7Z7L1 901 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 PRPF39Q86UA1 669 aaKnown RBP20.62■□□□□ 0.89
SMG8-204ENST00000580498 VPS36Q86VN1 386 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 TBC1D3Q8IZP1 549 aaPredicted RBP20.62■□□□□ 0.89
SMG8-204ENST00000580498 JOSD2Q8TAC2 188 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 NTAN1Q96AB6 310 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 IQCDQ96DY2 449 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 PPP1R16AQ96I34 528 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 FAM129BQ96TA1 746 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 ACE2Q9BYF1 805 aaPredicted RBP20.62■□□□□ 0.89
SMG8-204ENST00000580498 ADAM33Q9BZ11 813 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 GAREM1Q9H706 876 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 OR51B4Q9Y5P0 310 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 SNX10Q9Y5X0 201 aa20.62■□□□□ 0.89
SMG8-204ENST00000580498 ASCC3Q8N3C0 2202 aaKnown RBP20.61■□□□□ 0.89
SMG8-204ENST00000580498 LRRC53A6NM62 1247 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 TEX33O43247 280 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 DFNA5O60443 496 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 ZNF883P0CG24 379 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 RHOQP17081 205 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 RFC1P35251 1148 aaPredicted RBP20.61■□□□□ 0.89
SMG8-204ENST00000580498 CCR5P51681 352 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 ZNF143P52747 638 aaPredicted RBP20.61■□□□□ 0.89
SMG8-204ENST00000580498 RACK1P63244 317 aaKnown RBP20.61■□□□□ 0.89
SMG8-204ENST00000580498 GNA12Q03113 381 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 SKOR2Q2VWA4 1001 aaPredicted RBP20.61■□□□□ 0.89
SMG8-204ENST00000580498 INAVAQ3KP66 663 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 TRNP1Q6NT89 227 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.61■□□□□ 0.89
SMG8-204ENST00000580498 ZNF354CQ86Y25 554 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 DRC7Q8IY82 874 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 ZNF683Q8IZ20 524 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 PIP4K2CQ8TBX8 421 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 FRS2Q8WU20 508 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 TRIM11Q96F44 468 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 MCEEQ96PE7 176 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 EPAS1Q99814 870 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 TM9SF3Q9HD45 589 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 ANLNQ9NQW6 1124 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 PARVAQ9NVD7 372 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 DOCK4Q8N1I0 1966 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 PCDH15Q96QU1 1955 aa20.61■□□□□ 0.89
SMG8-204ENST00000580498 NUMA1Q14980 2115 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 A0A1B0GTH6 734 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 A0A1W2PPC4 97 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 PLEKP08567 350 aaPredicted RBP20.6■□□□□ 0.89
SMG8-204ENST00000580498 SRCP12931 536 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 ADPRHP54922 357 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 KLHL30Q0D2K2 578 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 PTP4A2Q12974 167 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 WDR59Q6PJI9 974 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 MCOLN2Q8IZK6 566 aa20.6■□□□□ 0.89
SMG8-204ENST00000580498 CENPIQ92674 756 aaPredicted RBP20.6■□□□□ 0.89
SMG8-204ENST00000580498 CNPY3Q9BT09 278 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms