RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 WFIKKN2Q8TEU8 576 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 NDRG1Q92597 394 aaKnown RBP19.99■□□□□ 0.79
LIMD2-209ENST00000580222 FBRSQ9HAH7 460 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 ADAMTS1Q9UHI8 967 aa19.99■□□□□ 0.79
LIMD2-209ENST00000580222 ARID1BQ8NFD5 2236 aaPredicted RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 MYH10P35580 1976 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 KLK10O43240 276 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 SIGLEC6O43699 453 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 SDC3O75056 442 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 SIN3BO75182 1162 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 PABPC1P11940 636 aaKnown RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 ARRB1P49407 418 aaPredicted RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 TBX2Q13207 712 aaPredicted RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 TDRD12Q587J7 1177 aaKnown RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 E4F1Q66K89 784 aaPredicted RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 ZNF677Q86XU0 584 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 CNGA4Q8IV77 575 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 UBA3Q8TBC4 463 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 SNRNP27Q8WVK2 155 aaKnown RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 MED8Q96G25 268 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 SERAC1Q96JX3 654 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 ZNF578Q96N58 590 aaPredicted RBP19.98■□□□□ 0.79
LIMD2-209ENST00000580222 DUSP16Q9BY84 665 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 TRIM4Q9C037 500 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 AIPL1Q9NZN9 384 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 NCKAP1Q9Y2A7 1128 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 SSUH2Q9Y2M2 353 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 UNC79Q9P2D8 2635 aa19.98■□□□□ 0.79
LIMD2-209ENST00000580222 FLNCQ14315 2725 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 GOLGA6L6A8MZA4 724 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 AKR1B15C9JRZ8 316 aaPredicted RBP19.97■□□□□ 0.79
LIMD2-209ENST00000580222 YKT6O15498 198 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 SETSIPP0DME0 302 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 PDE4CQ08493 712 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 VAC14Q08AM6 782 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 MEA1Q16626 185 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 TSR1Q2NL82 804 aaKnown RBP19.97■□□□□ 0.79
LIMD2-209ENST00000580222 BROXQ5VW32 411 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 CDCP2Q5VXM1 449 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 BHLHA9Q7RTU4 235 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 PASD1Q8IV76 773 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 SLC25A45Q8N413 288 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 SPC24Q8NBT2 197 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 OR2T34Q8NGX1 318 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 SLC20A1Q8WUM9 679 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 GOLGA1Q92805 767 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 SKA1Q96BD8 255 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 TMA16Q96EY4 203 aaKnown RBP19.97■□□□□ 0.79
LIMD2-209ENST00000580222 LMLNQ96KR4 655 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 ERVMER34-1Q9H9K5 563 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 SUN2Q9UH99 717 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 NOCTQ9UK39 431 aaKnown RBP19.97■□□□□ 0.79
LIMD2-209ENST00000580222 PCDHGC3Q9UN70 934 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 CEP83Q9Y592 693 aa19.97■□□□□ 0.79
LIMD2-209ENST00000580222 RNASEH2AO75792 299 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 MMEP08473 750 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 MYF5P13349 255 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 CCR5P51681 352 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 UCNP55089 124 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 ADKP55263 362 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 PPP2CBP62714 309 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 PPP2CAP67775 309 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 GABREP78334 506 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 KLHL30Q0D2K2 578 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 CST6Q15828 149 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 DENND1BQ6P3S1 775 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 IRF2BP2Q7Z5L9 587 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 MMAAQ8IVH4 418 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 AHI1Q8N157 1196 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 AADATQ8N5Z0 425 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 ANP32BQ92688 251 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 SYN2Q92777 582 aaPredicted RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 MRGPRX3Q96LB0 322 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 CDK5RAP1Q96SZ6 601 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 ASCL3Q9NQ33 180 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 ABHD10Q9NUJ1 306 aa19.96■□□□□ 0.79
LIMD2-209ENST00000580222 SEPT11Q9NVA2 429 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 ZNHIT6Q9NWK9 470 aaKnown RBP19.96■□□□□ 0.79
LIMD2-209ENST00000580222 A0A1W2PNU3 283 aaPredicted RBP19.95■□□□□ 0.78
LIMD2-209ENST00000580222 LRRC72A6NJI9 287 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 XPO1O14980 1071 aaKnown RBP19.95■□□□□ 0.78
LIMD2-209ENST00000580222 PRKCIP41743 596 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 CSRP3P50461 194 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 YWHAGP61981 247 aaKnown RBP eCLIP19.95■□□□□ 0.78
LIMD2-209ENST00000580222 CDR2Q01850 454 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 C9orf64Q5T6V5 341 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 RSRC2Q7L4I2 434 aaKnown RBP19.95■□□□□ 0.78
LIMD2-209ENST00000580222 OR8K1Q8NGG5 319 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 KCNE4Q8WWG9 221 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 PLD4Q96BZ4 506 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 FAM129BQ96TA1 746 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 DNAJC7Q99615 494 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 STOML2Q9UJZ1 356 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 INTS6Q9UL03 887 aaKnown RBP19.95■□□□□ 0.78
LIMD2-209ENST00000580222 STRIP2Q9ULQ0 834 aa19.95■□□□□ 0.78
LIMD2-209ENST00000580222 GOLGA6L7A0A1B0GV03 622 aa19.94■□□□□ 0.78
LIMD2-209ENST00000580222 USP12O75317 370 aa19.94■□□□□ 0.78
LIMD2-209ENST00000580222 DXOO77932 396 aaKnown RBP19.94■□□□□ 0.78
LIMD2-209ENST00000580222 ATP5BP06576 529 aaKnown RBP19.94■□□□□ 0.78
LIMD2-209ENST00000580222 SKILP12757 684 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms