RNA–Protein interactions for RNA: ENST00000579638.5

PPP4R1-214, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-214ENST00000579638 CDC6Q99741 560 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 MRPL45Q9BRJ2 306 aaKnown RBP7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 ZDHHC5Q9C0B5 715 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 GAREM1Q9H706 876 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 TRPC7Q9HCX4 862 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 ACP6Q9NPH0 428 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 CD93Q9NPY3 652 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 PLCB1Q9NQ66 1216 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 TM7SF3Q9NS93 570 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 SUSD2Q9UGT4 822 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 DNAJC12Q9UKB3 198 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 L1RE1Q9UN81 338 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 BTBD3Q9Y2F9 522 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 PCDHB5Q9Y5E4 795 aa7.3□□□□□ -1.24
PPP4R1-214ENST00000579638 ITIH6Q6UXX5 1313 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 TRAV19A0A0A6YYK7 116 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 KLHL33A6NCF5 533 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 C2orf78A6NCI8 922 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 KPNA7A9QM74 516 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 FOXN3O00409 490 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 RRP8O43159 456 aaKnown RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 GREM1O60565 184 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 APODP05090 189 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CKMP06732 381 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 GSTP1P09211 210 aaKnown RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CSH1P0DML2 217 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CSH2P0DML3 217 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 ODC1P11926 461 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 UCHL3P15374 230 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 GNSP15586 552 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 ATICP31939 592 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CASP14P31944 242 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 DGKGP49619 791 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CLDN6P56747 220 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 JAM2P57087 298 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 POLR2FP61218 127 aaKnown RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CXADRP78310 365 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 TLE3Q04726 772 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 TRPC3Q13507 836 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CUL2Q13617 745 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 DHCR24Q15392 516 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 SGSM1Q2NKQ1 1148 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 WDR72Q3MJ13 1102 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 TAF1BQ53T94 588 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CCDC157Q569K6 752 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 ZNF385CQ66K41 422 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 SPECC1LQ69YQ0 1117 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 RINLQ6ZS11 566 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 SPATA18Q8TC71 538 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 SPPL2BQ8TCT7 592 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 C2orf15Q8WU43 125 aaKnown RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 NXPE2Q96DL1 559 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 ERLEC1Q96DZ1 483 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 KLHDC7BQ96G42 594 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 PDLIM2Q96JY6 352 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 ZSWIM1Q9BR11 485 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 NT5C1AQ9BXI3 368 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 CD248Q9HCU0 757 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 UBE2TQ9NPD8 197 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 NLRC4Q9NPP4 1024 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 TMLHEQ9NVH6 421 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 APEX2Q9UBZ4 518 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 ZKSCAN5Q9Y2L8 839 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 SNX9Q9Y5X1 595 aa7.29□□□□□ -1.24
PPP4R1-214ENST00000579638 NOTCH2Q04721 2471 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 MYO9AB2RTY4 2548 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 A0A1B0GTW7 788 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 A0A1W2PQF6 199 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 LRRC53A6NM62 1247 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 F8VZ95 297 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 CYB561D2O14569 222 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 FLRT2O43155 660 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 TNFSF14O43557 240 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 MFAP3LO75121 409 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 ZNF217O75362 1048 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 C6P13671 934 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 CD58P19256 250 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 LMO2P25791 158 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 EIF2DP41214 584 aaKnown RBP7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 GRIA2P42262 883 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 MATKP42679 507 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 TNFRSF4P43489 277 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 TAF6P49848 677 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 ADKP55263 362 aaKnown RBP7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 KDSRQ06136 332 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 SMARCB1Q12824 385 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 SEPT6Q14141 434 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 LY6DQ14210 128 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 DRAP1Q14919 205 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 SUZ12Q15022 739 aaKnown RBP7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 POU4F3Q15319 338 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 TERF2Q15554 542 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 DDR2Q16832 855 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 ARHGAP44Q17R89 818 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 HLA-BQ31612 363 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 FIGNQ5HY92 759 aa7.28□□□□□ -1.24
PPP4R1-214ENST00000579638 COLEC12Q5KU26 742 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms