RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SIPA1Q96FS4 1042 aa15.57■□□□□ 0.08
LITAF-217ENST00000575426 MYO19Q96H55 970 aa15.57■□□□□ 0.08
LITAF-217ENST00000575426 SPACA7Q96KW9 195 aa15.57■□□□□ 0.08
LITAF-217ENST00000575426 CALR3Q96L12 384 aaKnown RBP15.57■□□□□ 0.08
LITAF-217ENST00000575426 PSMB7Q99436 277 aa15.57■□□□□ 0.08
LITAF-217ENST00000575426 NDFIP2Q9NV92 336 aa15.57■□□□□ 0.08
LITAF-217ENST00000575426 VPS51Q9UID3 782 aa15.57■□□□□ 0.08
LITAF-217ENST00000575426 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
LITAF-217ENST00000575426 A0A0A6YYK5 440 aaPredicted RBP15.56■□□□□ 0.08
LITAF-217ENST00000575426 MAP3K13O43283 966 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 SNAP91O60641 907 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 ZNF217O75362 1048 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 ERCC2P18074 760 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 NDUFV2P19404 249 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 SLC1A1P43005 524 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 CDH6P55285 790 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 GEMIN4P57678 1058 aaKnown RBP15.56■□□□□ 0.08
LITAF-217ENST00000575426 DLG2Q15700 870 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 C11orf74Q86VG3 221 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 SH2D3CQ8N5H7 860 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 ARHGEF2Q92974 986 aaKnown RBP15.56■□□□□ 0.08
LITAF-217ENST00000575426 MRGPRX1Q96LB2 322 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 CCDC114Q96M63 670 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 CWC15Q9P013 229 aaKnown RBP15.56■□□□□ 0.08
LITAF-217ENST00000575426 NEU3Q9UQ49 428 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 INVSQ9Y283 1065 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 SHROOM3Q8TF72 1996 aa15.56■□□□□ 0.08
LITAF-217ENST00000575426 PROB1E7EW31 1015 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 SPOPO43791 374 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 ATP9BO43861 1147 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 SIN3BO75182 1162 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 LMNAP02545 664 aaKnown RBP15.55■□□□□ 0.08
LITAF-217ENST00000575426 DNTTP04053 509 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 ACVRL1P37023 503 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 CLCN6P51797 869 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 NDST2P52849 883 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 HADHBP55084 474 aaKnown RBP15.55■□□□□ 0.08
LITAF-217ENST00000575426 SFSWAPQ12872 951 aaKnown RBP15.55■□□□□ 0.08
LITAF-217ENST00000575426 SRSF5Q13243 272 aaKnown RBP15.55■□□□□ 0.08
LITAF-217ENST00000575426 PDK2Q15119 407 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 PARP15Q460N3 678 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 TXNRD3NBQ6F5E7 133 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 POLNQ7Z5Q5 900 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 TMEM139Q8IV31 216 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 UMODL1-AS1Q8N2C9 162 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 LZTR1Q8N653 840 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 ACE2Q9BYF1 805 aaPredicted RBP15.55■□□□□ 0.08
LITAF-217ENST00000575426 PCDH18Q9HCL0 1135 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 CD248Q9HCU0 757 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 HS3ST2Q9Y278 367 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 ABCA7Q8IZY2 2146 aa15.55■□□□□ 0.08
LITAF-217ENST00000575426 CXorf51AA0A1B0GTR3 108 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 ZSCAN5CA6NGD5 496 aaPredicted RBP15.54■□□□□ 0.08
LITAF-217ENST00000575426 ARHGAP42A6NI28 874 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 RASA4BC9J798 803 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 RASA4O43374 803 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 KDELR3O43731 214 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 BNIP3LO60238 219 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 RHOBTB1O94844 696 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 SRCP12931 536 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 AMPD1P23109 780 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 GLDCP23378 1020 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 RECQLP46063 649 aaPredicted RBP15.54■□□□□ 0.08
LITAF-217ENST00000575426 MRE11P49959 708 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 VAV2P52735 878 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 COPAP53621 1224 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 TAS2R40P59535 323 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 C9orf64Q5T6V5 341 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 ZNF776Q68DI1 518 aaPredicted RBP15.54■□□□□ 0.08
LITAF-217ENST00000575426 LINGO4Q6UY18 593 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 DSG4Q86SJ6 1040 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 METTL3Q86U44 580 aaKnown RBP15.54■□□□□ 0.08
LITAF-217ENST00000575426 ACRBPQ8NEB7 543 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 RLN3Q8WXF3 142 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 OR8D1Q8WZ84 308 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 PTPRN2Q92932 1015 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 PHOX2BQ99453 314 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 CALN1Q9BXU9 219 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 MKRN2Q9H000 416 aaKnown RBP15.54■□□□□ 0.08
LITAF-217ENST00000575426 SLC6A17Q9H1V8 727 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 EPC1Q9H2F5 836 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 MTG2Q9H4K7 406 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 RCOR3Q9P2K3 495 aaPredicted RBP15.54■□□□□ 0.08
LITAF-217ENST00000575426 TFR2Q9UP52 801 aa15.54■□□□□ 0.08
LITAF-217ENST00000575426 BUB1O43683 1085 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 NDUFS2O75306 463 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 MT-CO1P00395 513 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 TNNT1P13805 278 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 PLA2G5P39877 138 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 P2RY2P41231 377 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 ZBTB16Q05516 673 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 KIF5AQ12840 1032 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 SERINC3Q13530 473 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 DPYSQ14117 519 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 ELF2Q15723 593 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 IFI16Q16666 785 aaKnown RBP15.53■□□□□ 0.08
LITAF-217ENST00000575426 TTC31Q49AM3 519 aaPredicted RBP15.53■□□□□ 0.08
LITAF-217ENST00000575426 ATP13A4Q4VNC1 1196 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms