RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ARSEP51690 589 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 AIF1P55008 147 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TAS2R38P59533 333 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 GNA12Q03113 381 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 GFPT1Q06210 699 aaPredicted RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 DPYSQ14117 519 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 STARD3Q14849 445 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 SLC18A3Q16572 532 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TDRD12Q587J7 1177 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 ACBD5Q5T8D3 534 aaPredicted RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 AGBL4Q5VU57 503 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 PPP1R2P3Q6NXS1 205 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 KIAA1324Q6UXG2 1013 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 LINGO4Q6UY18 593 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 ZNF783Q6ZMS7 281 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 Q6ZVU0 165 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 ARMCX6Q7L4S7 300 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 C11orf74Q86VG3 221 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TP53INP2Q8IXH6 220 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 DRC7Q8IY82 874 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 STK40Q8N2I9 435 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 RTL3Q8N8U3 475 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 OR2A12Q8NGT7 310 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 FAM71BQ8TC56 605 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 CPLX3Q8WVH0 158 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 DNASE2BQ8WZ79 361 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 ARHGEF2Q92974 986 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 RNF34Q969K3 372 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TBC1D31Q96DN5 1066 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 SIPA1Q96FS4 1042 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TOE1Q96GM8 510 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 NSMCE3Q96MG7 304 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 HSPA12BQ96MM6 686 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 PABPC3Q9H361 631 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 C6orf106Q9H6K1 298 aaPredicted RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 FBRSQ9HAH7 460 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 EBF2Q9HAK2 575 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 PARVAQ9NVD7 372 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMG6-216ENST00000575176 SLC12A6Q9UHW9 1150 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 GMEB2Q9UKD1 530 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 LUC7L2Q9Y383 392 aaKnown RBP8.89□□□□□ -0.99
SMG6-216ENST00000575176 PAXBP1Q9Y5B6 917 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 WASF2Q9Y6W5 498 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 USP24Q9UPU5 2620 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 LAMA5O15230 3695 aa8.89□□□□□ -0.99
SMG6-216ENST00000575176 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 EDDM13A0A1B0GTR0 161 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 CXorf51AA0A1B0GTR3 108 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 TARSL2A2RTX5 802 aaKnown RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 CDX4O14627 284 aaPredicted RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 MID1O15344 667 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 SRGAP2O75044 1071 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ZNF217O75362 1048 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 GJB3O75712 270 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 MYBL1P10243 752 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 PSMA2P25787 234 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 CD6P30203 668 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 PCK1P35558 622 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 LIMK1P53667 647 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 GALCP54803 685 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 TPM4P67936 248 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 RPL6Q02878 288 aaKnown RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 ZBTB16Q05516 673 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ZNF177Q13360 481 aaPredicted RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 TRIM14Q14142 442 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ELAVL3Q14576 367 aaKnown RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 ELF2Q15723 593 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 CST6Q15828 149 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 DPYSL2Q16555 572 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 PIP5KL1Q5T9C9 394 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ZNF776Q68DI1 518 aaPredicted RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 C22orf39Q6P5X5 142 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ALKBH5Q6P6C2 394 aaKnown RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 SND1Q7KZF4 910 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMG6-216ENST00000575176 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 TMEM139Q8IV31 216 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 UMODL1-AS1Q8N2C9 162 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 CHST14Q8NCH0 376 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 SPACA7Q96KW9 195 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 FSCN3Q9NQT6 498 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 VPS45Q9NRW7 570 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ETNK2Q9NVF9 386 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 EVLQ9UI08 416 aaPredicted RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 VPS28Q9UK41 221 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 PPM1HQ9ULR3 514 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 AP4E1Q9UPM8 1137 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 BZW2Q9Y6E2 419 aaKnown RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 SCINQ9Y6U3 715 aa8.88□□□□□ -0.99
SMG6-216ENST00000575176 ARID1BQ8NFD5 2236 aaPredicted RBP8.88□□□□□ -0.99
SMG6-216ENST00000575176 CELSR3Q9NYQ7 3312 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 CABIN1Q9Y6J0 2220 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PTPRBP23467 1997 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 PLK4O00444 970 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 MCF2LO15068 1137 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 ALOX15BO15296 676 aa8.87□□□□□ -0.99
SMG6-216ENST00000575176 MTA2O94776 668 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms