RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PM20D1Q6GTS8 502 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 OR52E8Q6IFG1 317 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CTU1Q7Z7A3 348 aaKnown RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 SLC25A41Q8N5S1 370 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 EPAS1Q99814 870 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 NMRAL1Q9HBL8 299 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 IARS2Q9NSE4 1012 aaKnown RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CACNG4Q9UBN1 327 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 PTCH2Q9Y6C5 1203 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ARHGAP42A6NI28 874 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MEIS3P2A8K0S8 358 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 AP3B1O00203 1094 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ZBTB14O43829 449 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TRIM13O60858 407 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 UPP2O95045 317 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MYL3P08590 195 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 NCF2P19878 526 aaPredicted RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 GLDCP23378 1020 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 NMBRP28336 390 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 HOXC8P31273 242 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 SERPINB6P35237 376 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 HADHAP40939 763 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 GSTA3Q16772 222 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 FSCBQ5H9T9 825 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MORN1Q5T089 497 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 PHTF2Q8N3S3 785 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TDRD5Q8NAT2 981 aaKnown RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TSGA13Q96PP4 275 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 PARK7Q99497 189 aaKnown RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TTC1Q99614 292 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 APOL2Q9BQE5 337 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 GATA5Q9BWX5 397 aaPredicted RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 C1QTNF1Q9BXJ1 281 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TKTL2Q9H0I9 626 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 VCXQ9H320 206 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 WDCPQ9H6R7 721 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 SLC38A7Q9NVC3 462 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 OXSMQ9NWU1 459 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 FLRT1Q9NZU1 646 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 DLGAP2Q9P1A6 1054 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CDH9Q9ULB4 789 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ANKRD6Q9Y2G4 727 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 PSMD3O43242 534 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 BAG2O95816 211 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 JCHAINP01591 159 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 APOA4P06727 396 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 COX4I1P13073 169 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TPH1P17752 444 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ERFP50548 548 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CDH17Q12864 832 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 KLF10Q13118 480 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 PRPSAP1Q14558 356 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 GRM3Q14832 879 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ANO4Q32M45 955 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 METTL21CQ5VZV1 264 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 IZUMO2Q6UXV1 221 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TMEM151AQ8N4L1 468 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 RDH11Q8TC12 318 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MAPK15Q8TD08 544 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 SREK1Q8WXA9 508 aaKnown RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 IRGQQ8WZA9 623 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 VPS39Q96JC1 886 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 NR1H4Q96RI1 486 aaPredicted RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 GPR22Q99680 433 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 PTPN18Q99952 460 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 KIFC1Q9BW19 673 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CSNK1G1Q9HCP0 422 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MIOSQ9NXC5 875 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 NSMCE4AQ9NXX6 385 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 OR12D3Q9UGF7 316 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 SCOCQ9UIL1 159 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CDH22Q9UJ99 828 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MID2Q9UJV3 735 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 TIMM13Q9Y5L4 95 aaPredicted RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 SORBS2O94875 1100 aaKnown RBP9.11□□□□□ -0.95
NCBP3-204ENST00000574911 LRIG2O94898 1065 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 SBK3P0C264 359 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 DNAJB2P25686 324 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CPT1AP50416 773 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CLCNKBP51801 687 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 PRKAA2P54646 552 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 DSG1Q02413 1049 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF33AQ06730 810 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ITGA7Q13683 1181 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CFAP157Q5JU67 520 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 DCLRE1AQ6PJP8 1040 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ZYG11AQ6WRX3 759 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 RNF111Q6ZNA4 994 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 FRMD7Q6ZUT3 714 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 CNTD1Q8N815 330 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 EDEM1Q92611 657 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 JADE3Q92613 823 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 IFT43Q96FT9 208 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 RTKNQ9BST9 563 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF408Q9H9D4 720 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MAN1C1Q9NR34 630 aa9.11□□□□□ -0.95
NCBP3-204ENST00000574911 MAGED2Q9UNF1 606 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms