RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SRPRAP08240 638 aaKnown RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 HNRNPLP14866 589 aaKnown RBP eCLIP17.47■□□□□ 0.39
NUP88-210ENST00000574867 KIR2DL1P43626 348 aaPredicted RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 PAPOLAP51003 745 aaKnown RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 MRPS21P82921 87 aaKnown RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 GBE1Q04446 702 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 GALNT2Q10471 571 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 CCDC181Q5TID7 509 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 AADACL2Q6P093 401 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 ATPAF2Q8N5M1 289 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 ZNF513Q8N8E2 541 aaPredicted RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 KDM1BQ8NB78 822 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 SNX12Q9UMY4 172 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 PLA2G4CQ9UP65 541 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 CES2O00748 559 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 KDELR3O43731 214 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 TUBB4AP04350 444 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 TCP1P17987 556 aaKnown RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 MAGEA9P43362 315 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 ADCY2Q08462 1091 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 LLGL1Q15334 1064 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 FLCNQ8NFG4 579 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 P3H4Q92791 437 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 SIT1Q9Y3P8 196 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 MTF2Q9Y483 593 aaPredicted RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 HEY1Q9Y5J3 304 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 NUP205Q92621 2012 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 KIF2AO00139 706 aaPredicted RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 SNAP91O60641 907 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 RNF40O75150 1001 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 ZMPSTE24O75844 475 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 GARSP41250 739 aaKnown RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 RPS9P46781 194 aaKnown RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 SEC13P55735 322 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 ST8SIA6P61647 398 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 PAPD7Q5XG87 772 aaKnown RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 CWF19L1Q69YN2 538 aaKnown RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 CLDN23Q96B33 292 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 OSBPL9Q96SU4 736 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 HERPUD2Q9BSE4 406 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 IER2Q9BTL4 223 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 LMAN1LQ9HAT1 526 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 THAP10Q9P2Z0 257 aaPredicted RBP17.46■□□□□ 0.39
NUP88-210ENST00000574867 ERVW-1Q9UQF0 538 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 HS3ST2Q9Y278 367 aa17.46■□□□□ 0.39
NUP88-210ENST00000574867 PPP1R12AO14974 1030 aaPredicted RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 CHRM1P11229 460 aaPredicted RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 PRLRP16471 622 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 CXCR5P32302 372 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 DEKP35659 375 aaKnown RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 NNMTP40261 264 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 ARF5P84085 180 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 SLC20A2Q08357 652 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 KLF1Q13351 362 aaPredicted RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 PDK1Q15118 436 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 PTPRNQ16849 979 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 EGFLAMQ63HQ2 1017 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 METTL3Q86U44 580 aaKnown RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 SLC13A5Q86YT5 568 aaPredicted RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 TTC13Q8NBP0 860 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 USP33Q8TEY7 942 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 CYB5D2Q8WUJ1 264 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 CASKIN2Q8WXE0 1202 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 SORCS1Q8WY21 1168 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 HDAC11Q96DB2 347 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 OLFM3Q96PB7 478 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 BRD8Q9H0E9 1235 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 SP110Q9HB58 689 aa17.45■□□□□ 0.38
NUP88-210ENST00000574867 RBM12Q9NTZ6 932 aaKnown RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 IPO11Q9UI26 975 aaKnown RBP17.45■□□□□ 0.38
NUP88-210ENST00000574867 CEP104O60308 925 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 PRAMEF11O60813 436 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 GLDCP23378 1020 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 CTSOP43234 321 aaPredicted RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 NUMBP49757 651 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 CLCN6P51797 869 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 ZNF33AQ06730 810 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 IL10RBQ08334 325 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 FZD5Q13467 585 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 ZNF234Q14588 700 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 TIGD7Q6NT04 549 aaPredicted RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 TP53INP2Q8IXH6 220 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 MAIP1Q8WWC4 291 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 MRGPRX3Q96LB0 322 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 PDFQ9HBH1 243 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 TRIOO75962 3097 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 PDGFBP01127 241 aaPredicted RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 PECAM1P16284 738 aaPredicted RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 AOC1P19801 751 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 CASQ1P31415 396 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 TIE1P35590 1138 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 SERPINH1P50454 418 aaKnown RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 SLC10A2Q12908 348 aaPredicted RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 FNDC3BQ53EP0 1204 aaKnown RBP17.44■□□□□ 0.38
NUP88-210ENST00000574867 C2orf27AQ580R0 203 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 NPNTQ6UXI9 565 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms