RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PILRBQ9UKJ0 227 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 PCDHB3Q9Y5E6 796 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 SNX10Q9Y5X0 201 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 EPN1Q9Y6I3 576 aaPredicted RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 ADAMTS9Q9P2N4 1935 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 DOCK4Q8N1I0 1966 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 EDDM13A0A1B0GTR0 161 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 LNP1A1A4G5 178 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TARSL2A2RTX5 802 aaKnown RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 USP27XA6NNY8 438 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 MEI4A8MW99 385 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TTC34A8MYJ7 566 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 SIN3BO75182 1162 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 LCA5LO95447 670 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 GJB6O95452 261 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 IGLV3-19P01714 112 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 KRT3P12035 628 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TNFAIP3P21580 790 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 SDC4P31431 198 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 HOXD12P35452 270 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 PLK1P53350 603 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 CDH4P55283 916 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 RPS14P62263 151 aaKnown RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 KRT83P78385 493 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 IRX4P78413 519 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 ZBTB16Q05516 673 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 PTP4A2Q12974 167 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TUBB2AQ13885 445 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 CDO1Q16878 200 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 DUOXA1Q1HG43 343 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TTC31Q49AM3 519 aaPredicted RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 WDR45BQ5MNZ6 344 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 ACBD5Q5T8D3 534 aaPredicted RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 CXorf57Q6NSI4 855 aaKnown RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 RAD9BQ6WBX8 426 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 RABEPKQ7Z6M1 372 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 FAM131BQ86XD5 332 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 PHF13Q86YI8 300 aaPredicted RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 SLC41A1Q8IVJ1 513 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 JOSD2Q8TAC2 188 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 GANCQ8TET4 914 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 RXFP2Q8WXD0 754 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 ZNF419Q96HQ0 510 aaPredicted RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 C1orf74Q96LT6 269 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 HAPLN3Q96S86 360 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TUBB2BQ9BVA1 445 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 SELENOOQ9BVL4 669 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 MTG2Q9H4K7 406 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 ANLNQ9NQW6 1124 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 TRMT1Q9NXH9 659 aaKnown RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 EVLQ9UI08 416 aaPredicted RBP9.33□□□□□ -0.92
NDE1-207ENST00000573203 SLCO3A1Q9UIG8 710 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 SLC25A13Q9UJS0 675 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 VPS28Q9UK41 221 aa9.33□□□□□ -0.92
NDE1-207ENST00000573203 NUMA1Q14980 2115 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 CACNA1AO00555 2505 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 SSU72P8A0A1W2PR75 194 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 ANKRD62A6NC57 917 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C2CD4BA6NLJ0 364 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 LRRC53A6NM62 1247 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C4orf47A7E2U8 309 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 EIF3CLB5ME19 914 aaKnown RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 E9PAM4 449 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 I6L893 689 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 SRGAP2O75044 1071 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 CNTN5O94779 1100 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 ENDOD1O94919 500 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 NDUFA10O95299 355 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 RHOCP08134 193 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 GNSP15586 552 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 MAOBP27338 520 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 CYLC1P35663 651 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 STK19P49842 368 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 ATXN3P54252 364 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 GSCP56915 257 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 GFPT1Q06210 699 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 ASIC2Q16515 512 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C15orf59Q2T9L4 293 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 ARL13BQ3SXY8 428 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 CCDC14Q49A88 953 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C5orf22Q49AR2 442 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 ALFQ53S48 1182 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C9orf64Q5T6V5 341 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 DAB2IPQ5VWQ8 1189 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 PEAR1Q5VY43 1037 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 DNAJC24Q6P3W2 148 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 SLC23A3Q6PIS1 610 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 MON1BQ7L1V2 547 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 BNIPLQ7Z465 357 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 IRF2BP2Q7Z5L9 587 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 TXLNBQ8N3L3 684 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C3orf20Q8ND61 904 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 CADM4Q8NFZ8 388 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 OR52K2Q8NGK3 314 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 BAP1Q92560 729 aa9.32□□□□□ -0.92
NDE1-207ENST00000573203 C16orf45Q96MC5 204 aaPredicted RBP9.32□□□□□ -0.92
NDE1-207ENST00000573203 EIF3CQ99613 913 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms