RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 NDUFV2P19404 249 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 GLDCP23378 1020 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 MAPKAPK2P49137 400 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 ST8SIA6P61647 398 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 MESDQ14696 234 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 E2F5Q15329 346 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 PSTKQ8IV42 348 aaKnown RBP16.2■□□□□ 0.18
CHD3-215ENST00000572750 PGBD3Q8N328 593 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 RTL3Q8N8U3 475 aaKnown RBP16.2■□□□□ 0.18
CHD3-215ENST00000572750 DCAF4L2Q8NA75 395 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 PARD6AQ9NPB6 346 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 KLHL11Q9NVR0 708 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 VPS51Q9UID3 782 aa16.2■□□□□ 0.18
CHD3-215ENST00000572750 RCCD1A6NED2 376 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 TTC34A8MYJ7 566 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 FGF10O15520 208 aaPredicted RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 LILRB5O75023 590 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 SRPRAP08240 638 aaKnown RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 RARAP10276 462 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 MAN1A1P33908 653 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 ACVRL1P37023 503 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 TAS2R40P59535 323 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 GNA12Q03113 381 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 SULT2A1Q06520 285 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 DPYSL2Q16555 572 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 LINGO4Q6UY18 593 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 RFX8Q6ZV50 586 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 SPON2Q9BUD6 331 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 C2orf49Q9BVC5 232 aaPredicted RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 MKRN2Q9H000 416 aaKnown RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 CATSPERBQ9H7T0 1116 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 ATP13A1Q9HD20 1204 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 LUC7LQ9NQ29 371 aaKnown RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 SLCO3A1Q9UIG8 710 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 SLC25A13Q9UJS0 675 aa16.19■□□□□ 0.18
CHD3-215ENST00000572750 CDV3Q9UKY7 258 aaKnown RBP16.19■□□□□ 0.18
CHD3-215ENST00000572750 ITPR1Q14643 2758 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 SMG1Q96Q15 3661 aaKnown RBP16.18■□□□□ 0.18
CHD3-215ENST00000572750 CCDC163A0A0D9SF12 145 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 CBX4O00257 560 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 RAMP2O60895 175 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 VAV1P15498 845 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 SDHBP21912 280 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 HTR7P34969 479 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 COPAP53621 1224 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 GSDMDP57764 484 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 CAMK2GQ13555 558 aaPredicted RBP16.18■□□□□ 0.18
CHD3-215ENST00000572750 HNRNPA1L2Q32P51 320 aaKnown RBP16.18■□□□□ 0.18
CHD3-215ENST00000572750 KIAA1324Q6UXG2 1013 aaKnown RBP16.18■□□□□ 0.18
CHD3-215ENST00000572750 ZNF783Q6ZMS7 281 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 TEKT4Q8WW24 435 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 COL26A1Q96A83 441 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 MRGPRX1Q96LB2 322 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 PPP1R9BQ96SB3 815 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 GOLPH3Q9H4A6 298 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 NOL6Q9H6R4 1146 aaKnown RBP16.18■□□□□ 0.18
CHD3-215ENST00000572750 PCDH18Q9HCL0 1135 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 CD93Q9NPY3 652 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 CWC15Q9P013 229 aaKnown RBP16.18■□□□□ 0.18
CHD3-215ENST00000572750 LCMT1Q9UIC8 334 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 INVSQ9Y283 1065 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 MFHAS1Q9Y4C4 1052 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 HYOU1Q9Y4L1 999 aa16.18■□□□□ 0.18
CHD3-215ENST00000572750 H3BRJ5 948 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 K7ERQ8 282 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 DCLK1O15075 740 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 DAPK3O43293 454 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 HRO43593 1189 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 SIN3BO75182 1162 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 RPP40O75818 363 aaKnown RBP16.17■□□□□ 0.18
CHD3-215ENST00000572750 MT-CO1P00395 513 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 CD48P09326 243 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 NOP2P46087 812 aaKnown RBP16.17■□□□□ 0.18
CHD3-215ENST00000572750 KRT83P78385 493 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 ARF5P84085 180 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 DPYSQ14117 519 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 KRT81Q14533 505 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 TCEAL1Q15170 157 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 LPAL2Q16609 132 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 HADHQ16836 314 aaKnown RBP16.17■□□□□ 0.18
CHD3-215ENST00000572750 BOLA3Q53S33 107 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 IL31Q6EBC2 164 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 PRR23BQ6ZRT6 265 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 FAM160A2Q8N612 972 aaPredicted RBP16.17■□□□□ 0.18
CHD3-215ENST00000572750 NPWQ8N729 165 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 KDM1BQ8NB78 822 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 NETO2Q8NC67 525 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 GAB3Q8WWW8 586 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 RLN3Q8WXF3 142 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 ARHGEF2Q92974 986 aaKnown RBP16.17■□□□□ 0.18
CHD3-215ENST00000572750 RTKNQ9BST9 563 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 RETREG1Q9H6L5 497 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 PRSS16Q9NQE7 514 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 NCDNQ9UBB6 729 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 HS3ST2Q9Y278 367 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 SPAG17Q6Q759 2223 aa16.17■□□□□ 0.18
CHD3-215ENST00000572750 EDDM13A0A1B0GTR0 161 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms