RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GUCY2CP25092 1073 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CD82P27701 267 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 MCM7P33993 719 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CHKAP35790 457 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 KRT2P35908 639 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 PLA2G4AP47712 749 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ART1P52961 327 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 SLC5A3P53794 718 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 NCKAP1LP55160 1127 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 RNASE9P60153 205 aaKnown RBP7.17□□□□□ -1.26
CHD3-213ENST00000571249 RBP5P82980 135 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 FGL2Q14314 439 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ZRANB3Q5FWF4 1079 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ADALQ6DHV7 355 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ALG1LQ6GMV1 187 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CPLX2Q6PUV4 134 aaKnown RBP7.17□□□□□ -1.26
CHD3-213ENST00000571249 BLOC1S2Q6QNY1 142 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ADIPOR2Q86V24 386 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 LAPTM4BQ86VI4 370 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CACNA2D3Q8IZS8 1091 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 SLC22A18ASQ8N1D0 253 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 FBXL16Q8N461 479 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 OR13H1Q8NG92 308 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 WDR48Q8TAF3 677 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CXorf38Q8TB03 319 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 DDI1Q8WTU0 396 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 KLK6Q92876 244 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 PTPRN2Q92932 1015 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 SLC45A3Q96JT2 553 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 JAKMIP1Q96N16 626 aaKnown RBP7.17□□□□□ -1.26
CHD3-213ENST00000571249 GBP4Q96PP9 640 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 GFM1Q96RP9 751 aaKnown RBP7.17□□□□□ -1.26
CHD3-213ENST00000571249 CALN1Q9BXU9 219 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 B3GNT5Q9BYG0 378 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 AGXT2Q9BYV1 514 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 SLC2A11Q9BYW1 496 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ELOVL4Q9GZR5 314 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 PIF1Q9H611 641 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 IL37Q9NZH6 218 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CYTH4Q9UIA0 394 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 NUDT5Q9UKK9 219 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 DMTF1Q9Y222 760 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ZDHHC9Q9Y397 364 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 TCHHQ07283 1943 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 TISP43B9A030 160 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 ANKRD63C9JTQ0 380 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 H0YCG3 227 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 SLC31A1O15431 190 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 LRRTM2O43300 516 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 DNAJB5O75953 348 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 IL18RAPO95256 599 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 RPLP0P05388 317 aaKnown RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 PTPN1P18031 435 aaKnown RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 WARSP23381 471 aaKnown RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 RPS6KB1P23443 525 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 HLA-FP30511 346 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 CCKBRP32239 447 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 GNL1P36915 607 aaPredicted RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 PSMD8P48556 350 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 METAP1P53582 386 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 WNT7BP56706 349 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 EVCP57679 992 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 ANKRD1Q15327 319 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 MBLAC2Q68D91 279 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 CRELD2Q6UXH1 353 aaPredicted RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 LIMS2Q7Z4I7 341 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 Q8NA96 180 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 TMEM145Q8NBT3 493 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 LRRN4CLQ8ND94 238 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 WFIKKN2Q8TEU8 576 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 TIPINQ9BVW5 301 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 CYP4F12Q9HCS2 524 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 FZD3Q9NPG1 666 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 TLR8Q9NR97 1041 aaKnown RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 PDRG1Q9NUG6 133 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 OSER1Q9NX31 292 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 GGT7Q9UJ14 662 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 SALL4Q9UJQ4 1053 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 AGO2Q9UKV8 859 aaKnown RBP7.16□□□□□ -1.26
CHD3-213ENST00000571249 ZNF510Q9Y2H8 683 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 NME7Q9Y5B8 376 aa7.16□□□□□ -1.26
CHD3-213ENST00000571249 NPHP3-ACAD11A0A0J9YXS1 232 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 LOC101059948A0A1B0GTJ6 334 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 FAM92AA1XBS5 289 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 ANKUB1A6NFN9 424 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 GABBR2O75899 941 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 ATP5BP06576 529 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 HMBSP08397 361 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 FURINP09958 794 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 PRLRP16471 622 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 CORO1AP31146 461 aaKnown RBP7.15□□□□□ -1.26
CHD3-213ENST00000571249 NOS2P35228 1153 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 PTGER4P35408 488 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 NUDT1P36639 197 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 RPIAP49247 311 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 CLDN2P57739 230 aa7.15□□□□□ -1.26
CHD3-213ENST00000571249 HNRNPKP61978 463 aaKnown RBP eCLIP7.15□□□□□ -1.26
CHD3-213ENST00000571249 ZFP36L1Q07352 338 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms