RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 ANKFY1Q9P2R3 1169 aa8.24□□□□□ -1.09
TCF4-246ENST00000570287 PCDHB4Q9Y5E5 795 aa8.24□□□□□ -1.09
TCF4-246ENST00000570287 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.24□□□□□ -1.09
TCF4-246ENST00000570287 LINC00854A0A1B0GVQ3 168 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 H0Y3Z8 333 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 CLDN3O15551 220 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 TGM5O43548 720 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 GJB3O75712 270 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 UBXN7O94888 489 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 PROSCO94903 275 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 CALCAP01258 141 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 ITGA2BP08514 1039 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 ITGA8P53708 1063 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 NOMO3P69849 1222 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 PRKG1Q13976 671 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 LIN54Q6MZP7 749 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 LRFN4Q6PJG9 635 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 METTL7BQ6UX53 244 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 USP53Q70EK8 1073 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 ZC3H18Q86VM9 953 aaKnown RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 PHF13Q86YI8 300 aaPredicted RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 SMC6Q96SB8 1091 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 SPATC1LQ9H0A9 340 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 LRFN1Q9P244 771 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 TUBGCP4Q9UGJ1 667 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 TIMM22Q9Y584 194 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 RHPN2P1A8MT19 583 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 TP73O15350 636 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 PSTPIP1O43586 416 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 STRNO43815 780 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 GAS2O43903 313 aaKnown RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 TBX10O75333 385 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 CLTBP09497 229 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 NME2P22392 152 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 FOXN2P32314 431 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 TCF7P36402 384 aaPredicted RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 SLC18A1P54219 525 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 NOP14P78316 857 aaKnown RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 SGO2Q562F6 1265 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 VARS2Q5ST30 1063 aaKnown RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 ZBTB41Q5SVQ8 909 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 TMEM270Q6UE05 265 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 ARHGEF18Q6ZSZ5 1173 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 MARK2Q7KZI7 788 aaKnown RBP8.23□□□□□ -1.09
TCF4-246ENST00000570287 NAT14Q8WUY8 206 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 PPP2R3CQ969Q6 453 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 HIC2Q96JB3 615 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 KLHL25Q9H0H3 589 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 EURLQ9NYK6 297 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 CSADQ9Y600 493 aa8.23□□□□□ -1.09
TCF4-246ENST00000570287 FRS3O43559 492 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 B3GALT2O43825 422 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 TUSC2O75896 110 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PSMG1O95456 288 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 EDN1P05305 212 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PSMA3P25788 255 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 SLCO1A2P46721 670 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 HPCAP84074 193 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 HNRNPDQ14103 355 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 CNN3Q15417 329 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 ACSBG2Q5FVE4 666 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 RFWD3Q6PCD5 774 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 TXNDC11Q6PKC3 985 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PDZD3Q86UT5 571 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 VSIG1Q86XK7 387 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 WDR49Q8IV35 697 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 OR5B17Q8NGF7 314 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 GRK7Q8WTQ7 553 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 C10orf82Q8WW14 230 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 TUBGCP5Q96RT8 1024 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PITPNM3Q9BZ71 974 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 IMPG2Q9BZV3 1241 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 WHRNQ9P202 907 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 CROTQ9UKG9 612 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 DICER1Q9UPY3 1922 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 POLR2AP24928 1970 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 LRRC37A2A6NM11 1700 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PAPPA2Q9BXP8 1791 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 A0A0J9YVX5 310 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 SMIM23A6NLE4 172 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 CLASP2O75122 1294 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 TOM1L1O75674 476 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 CSTBP04080 98 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 CRABP2P29373 138 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 KCNJ1P48048 391 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 CLCN2P51788 898 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PLOD1Q02809 727 aaPredicted RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 CALCOCO2Q13137 446 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 UAP1L1Q3KQV9 507 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PLEKHA7Q6IQ23 1121 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PPP1R21Q6ZMI0 780 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 PRPF31Q8WWY3 499 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 NANOS1Q8WY41 292 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 USP13Q92995 863 aaPredicted RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 CADM1Q9BY67 442 aaKnown RBP8.22□□□□□ -1.09
TCF4-246ENST00000570287 LMAN2LQ9H0V9 348 aa8.22□□□□□ -1.09
TCF4-246ENST00000570287 SYNCQ9H7C4 482 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms