RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SYCP1Q15431 976 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 KIF19Q2TAC6 998 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FAM46CQ5VWP2 391 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 LRSAM1Q6UWE0 723 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 STRADAQ7RTN6 431 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PHF13Q86YI8 300 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CENPIQ92674 756 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CFAP57Q96MR6 1250 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NLRC4Q9NPP4 1024 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PCOLCE2Q9UKZ9 415 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FNDC3AQ9Y2H6 1198 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PTPRBP23467 1997 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ILVBLA1L0T0 632 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 C2CD4BA6NLJ0 364 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GOLGA8SH3BPF8 625 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PLRG1O43660 514 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SH3BP5O60239 455 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 IL1BP01584 269 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RHOCP08134 193 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SRCP12931 536 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 VAV1P15498 845 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GGCXP38435 758 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FAM193AP78312 1265 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FOXC1Q12948 553 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TRIP6Q15654 476 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DLG2Q15700 870 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 C2CD6Q53TS8 623 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MANEALQ5VSG8 457 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RAB44Q7Z6P3 723 aaPredicted RBP17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NEK11Q8NG66 645 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GANCQ8TET4 914 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 BPIFA3Q9BQP9 254 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MUC3BQ9H195 1237 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 IL21RQ9HBE5 538 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 METTL5Q9NRN9 209 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 VPS51Q9UID3 782 aa17.52■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SPAARA0A1B0GVQ0 90 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TMEM8BA6NDV4 472 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C1QTNF3-AMACRE9PGA6 284 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 DKK1O94907 266 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 UBXN1Q04323 297 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ST3GAL2Q16842 350 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TRIM69Q86WT6 500 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 FAM131BQ86XD5 332 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C3orf20Q8ND61 904 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TMIEQ8NEW7 156 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 GATA6Q92908 595 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CCDC114Q96M63 670 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PCDHB18PQ96TA0 734 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SCNM1Q9BWG6 230 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OSBPL2Q9H1P3 480 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 EBF2Q9HAK2 575 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SARDHQ9UL12 918 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MYO6Q9UM54 1294 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SNX11Q9Y5W9 270 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ASPMQ8IZT6 3477 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SPEGQ15772 3267 aa17.51■□□□□ 0.39
MAP1LC3B-208ENST00000570189 AKAP13Q12802 2813 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CALB1P05937 261 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PROS1P07225 676 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SDC4P31431 198 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ADRA1BP35368 520 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NSFP46459 744 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SLC20A2Q08357 652 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SCAPQ12770 1279 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SUZ12Q15022 739 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CLEC16AQ2KHT3 1053 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ARL13BQ3SXY8 428 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CCDC14Q49A88 953 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 AGBL4Q5VU57 503 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 Q6ZVU0 165 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MON1BQ7L1V2 547 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 EMC1Q8N766 993 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 KDF1Q8NAX2 398 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OR14C36Q8NHC7 312 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PIP4K2CQ8TBX8 421 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ADAMTS14Q8WXS8 1223 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NTAN1Q96AB6 310 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SKA1Q96BD8 255 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ACE2Q9BYF1 805 aaPredicted RBP17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CEP44Q9C0F1 390 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TMPRSS4Q9NRS4 437 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MPP6Q9NZW5 540 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MSRB2Q9Y3D2 182 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PCDHB9Q9Y5E1 797 aa17.5■□□□□ 0.39
MAP1LC3B-208ENST00000570189 A0A0D9SEW6 157 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 A0A1W2PR77 199 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TCRBV5S1A1TA0A578 114 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SNAP91O60641 907 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ZMPSTE24O75844 475 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 MT-CO1P00395 513 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CDK11BP21127 795 aaKnown RBP17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OR1E1P30953 314 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ETFBP38117 255 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 CCT8P50990 548 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TYRO3Q06418 890 aa17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ACCSLQ4AC99 568 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms