RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OR7D4Q8NG98 312 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 DNASE2BQ8WZ79 361 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 TBC1D31Q96DN5 1066 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 C2orf49Q9BVC5 232 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 NUSAP1Q9BXS6 441 aaKnown RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 PCED1AQ9H1Q7 454 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 CAPN10Q9HC96 672 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 NDFIP2Q9NV92 336 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 SERGEFQ9UGK8 458 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 DCDC2BA2VCK2 349 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 METTL12A8MUP2 240 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 CDX4O14627 284 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-220ENST00000569916 RTN2O75298 545 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 SEMA4FO95754 770 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 MT-CO1P00395 513 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 SERPING1P05155 500 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 CFIP05156 583 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 SERPINF2P08697 491 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 RHOQP17081 205 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 ENGP17813 658 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 PSMD8P48556 350 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 GNA12Q03113 381 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 DLG2Q15700 870 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 EFHC2Q5JST6 749 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 SYCP2LQ5T4T6 812 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 RWDD4Q6NW29 188 aaKnown RBP13.35□□□□□ -0.27
CNOT1-220ENST00000569916 SCYL2Q6P3W7 929 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 Q6ZVU0 165 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 RABEPKQ7Z6M1 372 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 AADATQ8N5Z0 425 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 CEP76Q8TAP6 659 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 CPLX3Q8WVH0 158 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 C6orf106Q9H6K1 298 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-220ENST00000569916 SGK2Q9HBY8 427 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 TMEM248Q9NWD8 314 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 FBXL12Q9NXK8 326 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 CNOT8Q9UFF9 292 aaKnown RBP13.35□□□□□ -0.27
CNOT1-220ENST00000569916 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 FZD10Q9ULW2 581 aa13.35□□□□□ -0.27
CNOT1-220ENST00000569916 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
CNOT1-220ENST00000569916 TMEM131Q92545 1883 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 GON4LQ3T8J9 2241 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 A0A1W2PP55 124 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 K7ERQ8 282 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 TM4SF5O14894 197 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 ZMPSTE24O75844 475 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 ADH1BP00325 375 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 C5AR1P21730 350 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 PSMA2P25787 234 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 CASP14P31944 242 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 L1CAMP32004 1257 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 SLC8A1P32418 973 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 MAPKAPK2P49137 400 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 AIF1P55008 147 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 ARF5P84085 180 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 SEMA3BQ13214 749 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 IL31Q6EBC2 164 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 LINGO4Q6UY18 593 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 ARFGAP1Q8N6T3 406 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 OR8D1Q8WZ84 308 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 ATP13A1Q9HD20 1204 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 TMEM9BQ9NQ34 198 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 SUSD2Q9UGT4 822 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 DNAI1Q9UI46 699 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 FZD4Q9ULV1 537 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 SLC6A14Q9UN76 642 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 NCKAP1Q9Y2A7 1128 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-220ENST00000569916 LUC7L2Q9Y383 392 aaKnown RBP13.34□□□□□ -0.27
CNOT1-220ENST00000569916 SCINQ9Y6U3 715 aa13.34□□□□□ -0.27
CNOT1-220ENST00000569916 C4orf47A7E2U8 309 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 CBX4O00257 560 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 MCF2LO15068 1137 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 ALOX15BO15296 676 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 CBFA2T2O43439 604 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 SMAD6O43541 496 aaKnown RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 RNASEH2AO75792 299 aaKnown RBP13.33□□□□□ -0.28
CNOT1-220ENST00000569916 IL1BP01584 269 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 TPM3P06753 285 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 MYBL1P10243 752 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 DESP17661 470 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 DRD3P35462 400 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 CLCN6P51797 869 aa13.33□□□□□ -0.28
CNOT1-220ENST00000569916 METAP1P53582 386 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms