RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SLC8A2Q9UPR5 921 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 HEY1Q9Y5J3 304 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 KANSL1LA0AUZ9 987 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 MFSD11O43934 449 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 HNRNPLP14866 589 aaKnown RBP eCLIP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 MZF1P28698 734 aaPredicted RBP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 SOX9P48436 509 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 PAPOLAP51003 745 aaKnown RBP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 ECT2LQ008S8 904 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 LRRC32Q14392 662 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 NOMO1Q15155 1222 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 GEN1Q17RS7 908 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 DRICH1Q6PGQ1 229 aaPredicted RBP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 TRMT11Q7Z4G4 463 aaKnown RBP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 ATPAF2Q8N5M1 289 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 OR52K2Q8NGK3 314 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 NSMCE1Q8WV22 266 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 HMCESQ96FZ2 354 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 SPON2Q9BUD6 331 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 AMACRQ9UHK6 382 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 IPO11Q9UI26 975 aaKnown RBP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 SLC25A13Q9UJS0 675 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 INTS6Q9UL03 887 aaKnown RBP23.98■■□□□ 1.43
RAB40C-212ENST00000569575 HS3ST2Q9Y278 367 aa23.98■■□□□ 1.43
RAB40C-212ENST00000569575 GOLGA6L10A0A0M3HER8 536 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 DFFAO00273 331 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 MCF2LO15068 1137 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 PRAMEF11O60813 436 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 DYNLT1P63172 113 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 MRPS21P82921 87 aaKnown RBP23.97■■□□□ 1.43
RAB40C-212ENST00000569575 GBE1Q04446 702 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 PPIDQ08752 370 aaKnown RBP23.97■■□□□ 1.43
RAB40C-212ENST00000569575 CCNG2Q16589 344 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 FUT11Q495W5 492 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 MIA3Q5JRA6 1907 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 AADACL2Q6P093 401 aa23.97■■□□□ 1.43
RAB40C-212ENST00000569575 ZMPSTE24O75844 475 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 ST8SIA6P61647 398 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 ADCY2Q08462 1091 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 SLC10A2Q12908 348 aaPredicted RBP23.96■■□□□ 1.43
RAB40C-212ENST00000569575 HNRNPDQ14103 355 aaKnown RBP23.96■■□□□ 1.43
RAB40C-212ENST00000569575 PON2Q15165 354 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 TXNDC11Q6PKC3 985 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 ZNF354CQ86Y25 554 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 CREG2Q8IUH2 290 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 APCDD1Q8J025 514 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 BBS5Q8N3I7 341 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 OR7D4Q8NG98 312 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 ACTL9Q8TC94 416 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 COG1Q8WTW3 980 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 TFB1MQ8WVM0 346 aaKnown RBP23.96■■□□□ 1.43
RAB40C-212ENST00000569575 CELF6Q96J87 481 aaKnown RBP23.96■■□□□ 1.43
RAB40C-212ENST00000569575 VAT1Q99536 393 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 IER2Q9BTL4 223 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 SP110Q9HB58 689 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 FEZ2Q9UHY8 353 aaPredicted RBP23.96■■□□□ 1.43
RAB40C-212ENST00000569575 CA14Q9ULX7 337 aa23.96■■□□□ 1.43
RAB40C-212ENST00000569575 CFAP69A5D8W1 941 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 CBX4O00257 560 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 FANCGO15287 622 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 MAFKO60675 156 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 STIP1P31948 543 aaKnown RBP23.95■■□□□ 1.42
RAB40C-212ENST00000569575 ACVRL1P37023 503 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 MAGEA9P43362 315 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 OTUD4Q01804 1114 aaKnown RBP23.95■■□□□ 1.42
RAB40C-212ENST00000569575 KDSRQ06136 332 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 CCINQ13939 588 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 FSTL4Q6MZW2 842 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 SIX5Q8N196 739 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 ISG20Q96AZ6 181 aaKnown RBP23.95■■□□□ 1.42
RAB40C-212ENST00000569575 CIPCQ9C0C6 399 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 CEP44Q9C0F1 390 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 VPS51Q9UID3 782 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 CDC23Q9UJX2 597 aa23.95■■□□□ 1.42
RAB40C-212ENST00000569575 KRBA1A5PL33 1030 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 SHISA7A6NL88 538 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 PRRT4C9JH25 899 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 K7EQS6 105 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 MATN3O15232 486 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 HSPA9P38646 679 aaKnown RBP23.94■■□□□ 1.42
RAB40C-212ENST00000569575 RENBPP51606 427 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 LMNB2Q03252 620 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 TMEM215Q68D42 235 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 CDKL3Q8IVW4 592 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-212ENST00000569575 PLPP6Q8IY26 295 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 CCDC13Q8IYE1 715 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 CCNYQ8ND76 341 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 SLC35B2Q8TB61 432 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 NKD2Q969F2 451 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-212ENST00000569575 NECAB3Q96P71 396 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-212ENST00000569575 HERPUD2Q9BSE4 406 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 PDFQ9HBH1 243 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 LTB4R2Q9NPC1 389 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 THAP10Q9P2Z0 257 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-212ENST00000569575 ERVW-1Q9UQF0 538 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 DRG1Q9Y295 367 aaKnown RBP23.94■■□□□ 1.42
RAB40C-212ENST00000569575 MFHAS1Q9Y4C4 1052 aa23.94■■□□□ 1.42
RAB40C-212ENST00000569575 BCLAF3A2AJT9 711 aaKnown RBP23.93■■□□□ 1.42
RAB40C-212ENST00000569575 TRIM24O15164 1050 aa23.93■■□□□ 1.42
RAB40C-212ENST00000569575 ATG13O75143 517 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms