RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF445P59923 1031 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ABHD18Q0P651 414 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 NR5A1Q13285 461 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PTK2BQ14289 1009 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ELAVL3Q14576 367 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ZNF284Q2VY69 593 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 C10orf120Q5SQS8 335 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 AGBL4Q5VU57 503 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PAPD7Q5XG87 772 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ADALQ6DHV7 355 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 SLFN12LQ6IEE8 588 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 OR6B2Q6IFH4 312 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 KYAT3Q6YP21 454 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PRIMA1Q86XR5 153 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 DENND1CQ8IV53 801 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 NLGN4XQ8N0W4 816 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 STK40Q8N2I9 435 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 B3GALNT2Q8NCR0 500 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 NLGN4YQ8NFZ3 816 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PMEPA1Q969W9 287 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 SPRY4Q9C004 299 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 GSX1Q9H4S2 264 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 NMUR1Q9HB89 426 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 CBX8Q9HC52 389 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 MLXIPLQ9NP71 852 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 SLAMF7Q9NQ25 335 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 NUDT5Q9UKK9 219 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 SCML2Q9UQR0 700 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 POLHQ9Y253 713 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 RNF215Q9Y6U7 377 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 PIKFYVEQ9Y2I7 2098 aa6.84□□□□□ -1.31
HERPUD1-217ENST00000569429 ATP8B3O60423 1300 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 A0A1W2PQU0 124 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 CPLX1O14810 134 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 YY2O15391 372 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ZG16O60844 167 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 LRCH4O75427 683 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 SRPRAP08240 638 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 COX6B1P14854 86 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 PNLIPP16233 465 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 CD70P32970 193 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 METAP1P53582 386 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ADKP55263 362 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 WNT7BP56706 349 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 TAS2R38P59533 333 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 KRTAP10-9P60411 292 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 LTBQ06643 244 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 EIF2B5Q13144 721 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ADAM9Q13443 819 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ARHGAP44Q17R89 818 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 PHF19Q5T6S3 580 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 JMJD6Q6NYC1 403 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 PAQR9Q6ZVX9 377 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 PTAR1Q7Z6K3 402 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 FAM35AQ86V20 835 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 HORMAD1Q86X24 394 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 CCNJLQ8IV13 435 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ZNF557Q8N988 423 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ZMIZ2Q8NF64 920 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 KLK6Q92876 244 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 SMARCD1Q96GM5 515 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 LMLNQ96KR4 655 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 RANBP9Q96S59 729 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 MRPL45Q9BRJ2 306 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ASPSCR1Q9BZE9 553 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 SNX25Q9H3E2 840 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 DPEP3Q9H4B8 488 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 CHST11Q9NPF2 352 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 FZD3Q9NPG1 666 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 MAP10Q9P2G4 905 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 COPG2Q9UBF2 871 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 GULP1Q9UBP9 304 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 APPL1Q9UKG1 709 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 CROTQ9UKG9 612 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 PCDHB3Q9Y5E6 796 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 PCDHGA9Q9Y5G4 932 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 OAS3Q9Y6K5 1087 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 INTS1Q8N201 2190 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 ANK2Q01484 3957 aa6.83□□□□□ -1.32
HERPUD1-217ENST00000569429 NCOA6Q14686 2063 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 POM121BA6NF01 834 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 TTC34A8MYJ7 566 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 ANKRD63C9JTQ0 380 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 SPINT1O43278 529 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 LRRTM2O43300 516 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 HMBSP08397 361 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CPA1P15085 419 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 KRT2P35908 639 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CSKP41240 450 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 RABIFP47224 123 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 PSEN1P49768 467 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 PGDP52209 483 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 ART1P52961 327 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CNTN1Q12860 1018 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 C1orf61Q13536 156 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 MPP7Q5T2T1 576 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms