RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 KIF2AO00139 706 aaPredicted RBP16.41■□□□□ 0.22
USB1-215ENST00000569252 DFFAO00273 331 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 CST8O60676 142 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 KRT10P13645 584 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 MX2P20592 715 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 HLA-FP30511 346 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 CD70P32970 193 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 CSKP41240 450 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 NR2C2P49116 596 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 ST8SIA6P61647 398 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 DYNLT1P63172 113 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 ZNF211Q13398 564 aaPredicted RBP16.41■□□□□ 0.22
USB1-215ENST00000569252 EIF4HQ15056 248 aaKnown RBP16.41■□□□□ 0.22
USB1-215ENST00000569252 FBXO43Q4G163 708 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 DGKKQ5KSL6 1271 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 UMODL1-AS1Q8N2C9 162 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 TERB1Q8NA31 727 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 PCDH19Q8TAB3 1148 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 NSMCE1Q8WV22 266 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 ALG3Q92685 438 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 FAF2Q96CS3 445 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 NAPGQ99747 312 aaPredicted RBP16.41■□□□□ 0.22
USB1-215ENST00000569252 HEMGNQ9BXL5 484 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 CARD9Q9H257 536 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 ATP13A1Q9HD20 1204 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 SLC25A13Q9UJS0 675 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 CLEC4EQ9ULY5 219 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 SLC8A2Q9UPR5 921 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 HEY1Q9Y5J3 304 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 RAD54BQ9Y620 910 aa16.41■□□□□ 0.22
USB1-215ENST00000569252 COL4A2P08572 1712 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 A0A0A0MRY4 1105 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 C3orf70A6NLC5 250 aaPredicted RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 RASA4BC9J798 803 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 DCLK1O15075 740 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 RASA4O43374 803 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 CEP104O60308 925 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 ASLP04424 464 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 TGM1P22735 817 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 PLK1P53350 603 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 GEMIN4P57678 1058 aaKnown RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 DMWDQ09019 674 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 SRSF5Q13243 272 aaKnown RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 LLGL1Q15334 1064 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 GAB4Q2WGN9 574 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 TMEM196Q5HYL7 178 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 MBLAC2Q68D91 279 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 RNF43Q68DV7 783 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 CXorf57Q6NSI4 855 aaKnown RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 RETSATQ6NUM9 610 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 TRMT11Q7Z4G4 463 aaKnown RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 LRRC49Q8IUZ0 686 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.4■□□□□ 0.22
USB1-215ENST00000569252 KCNV2Q8TDN2 545 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 MAIP1Q8WWC4 291 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 P3H4Q92791 437 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 ACDQ96AP0 544 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 CELF6Q96J87 481 aaKnown RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 PSMB7Q99436 277 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 NAP1L3Q99457 506 aaPredicted RBP16.4■□□□□ 0.22
USB1-215ENST00000569252 FERMT1Q9BQL6 677 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 TLR10Q9BXR5 811 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 ELOVL2Q9NXB9 296 aa16.4■□□□□ 0.22
USB1-215ENST00000569252 hCG_1818297A0A087WSY0 165 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 ZSCAN5CA6NGD5 496 aaPredicted RBP16.39■□□□□ 0.21
USB1-215ENST00000569252 CBX4O00257 560 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 TRIM24O15164 1050 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 TCP1P17987 556 aaKnown RBP16.39■□□□□ 0.21
USB1-215ENST00000569252 TGM2P21980 687 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 PTPN7P35236 360 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 ECT2LQ008S8 904 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 SLC20A2Q08357 652 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 PAFAH1B3Q15102 231 aaKnown RBP16.39■□□□□ 0.21
USB1-215ENST00000569252 TAZQ16635 292 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 GEN1Q17RS7 908 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 PLEKHG6Q3KR16 790 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 TXNDC11Q6PKC3 985 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 SYNPOQ8N3V7 929 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 TTC13Q8NBP0 860 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 WFDC5Q8TCV5 224 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
USB1-215ENST00000569252 SLC39A8Q9C0K1 460 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 LMAN1LQ9HAT1 526 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 FBXO4Q9UKT5 387 aa16.39■□□□□ 0.21
USB1-215ENST00000569252 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.21
USB1-215ENST00000569252 SDK1Q7Z5N4 2213 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 A0A0D9SEW6 157 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 PPP1R12AO14974 1030 aaPredicted RBP16.38■□□□□ 0.21
USB1-215ENST00000569252 NPC1O15118 1278 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 KDELR3O43731 214 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 LILRB5O75023 590 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 ATG13O75143 517 aa16.38■□□□□ 0.21
USB1-215ENST00000569252 NEBLO76041 1014 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms