RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 RRM1P23921 792 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 PRKCIP41743 596 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 PSMD8P48556 350 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 FIGNQ5HY92 759 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 DSG4Q86SJ6 1040 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 MINDY1Q8N5J2 469 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 AADATQ8N5Z0 425 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 OR8D1Q8WZ84 308 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 NTAN1Q96AB6 310 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 HAUS4Q9H6D7 363 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 OSGEPQ9NPF4 335 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 DNAAF2Q9NVR5 837 aaKnown RBP20.8■□□□□ 0.92
CLK3-225ENST00000569063 TAS2R14Q9NYV8 317 aa20.8■□□□□ 0.92
CLK3-225ENST00000569063 ANKRD62A6NC57 917 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 UPK3BL1B0FP48 263 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 C10orf142B7Z368 130 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 UPK3BL2E5RIL1 263 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 MCF2LO15068 1137 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 ALOX15BO15296 676 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 MT-CO1P00395 513 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 IL1BP01584 269 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 GALCP54803 685 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 RPL7AP62424 266 aaKnown RBP20.79■□□□□ 0.92
CLK3-225ENST00000569063 FANCCQ00597 558 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 SCAPQ12770 1279 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 SEMA3BQ13214 749 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 KIAA0895LQ68EN5 471 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 CCDC185Q8N715 623 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 SNX19Q92543 992 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 MCEEQ96PE7 176 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 PPM1HQ9ULR3 514 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 DOCK4Q8N1I0 1966 aa20.79■□□□□ 0.92
CLK3-225ENST00000569063 NYNRINQ9P2P1 1898 aaKnown RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 FAM72CH0Y354 149 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 CCP110O43303 1012 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 OPHN1O60890 802 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 FSBPO95073 299 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 IGHV4-34P06331 123 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 PLEKP08567 350 aaPredicted RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 GZMAP12544 262 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 CEACAM1P13688 526 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 RHOQP17081 205 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 CD27P26842 260 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 NOVA1P51513 510 aaKnown RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 CLCN6P51797 869 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 AFF3P51826 1226 aaKnown RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 GNA12Q03113 381 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 GRIK2Q13002 908 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 SKOR2Q2VWA4 1001 aaPredicted RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 ZSCAN23Q3MJ62 389 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 N4BP2L1Q5TBK1 243 aaPredicted RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 FAM72AQ5TYM5 149 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 FAM46CQ5VWP2 391 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 E4F1Q66K89 784 aaPredicted RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 FAM72DQ6L9T8 149 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 PSAPL1Q6NUJ1 521 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 Q6ZVU0 165 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 ZNF571Q7Z3V5 609 aaPredicted RBP20.78■□□□□ 0.92
CLK3-225ENST00000569063 SLFN11Q7Z7L1 901 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 NLRP14Q86W24 1093 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 FAM72BQ86X60 149 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 HDDC3Q8N4P3 179 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 ATP11CQ8NB49 1132 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 OR2T34Q8NGX1 318 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 FAM131CQ96AQ9 280 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 CNPY3Q9BT09 278 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 MAGEB5Q9BZ81 275 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 NEU3Q9UQ49 428 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 ADAMTS9Q9P2N4 1935 aa20.78■□□□□ 0.92
CLK3-225ENST00000569063 CXorf51AA0A1B0GTR3 108 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 LRRC72A6NJI9 287 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 GJB3O75712 270 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 LRIG2O94898 1065 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 KCNA4P22459 653 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 DRD3P35462 400 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 PBX1P40424 430 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 MAPKAPK2P49137 400 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 UBASH3AP57075 661 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 SLC20A2Q08357 652 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 SLC14A1Q13336 389 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 MAMLD1Q13495 774 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 DCUN1D2Q6PH85 259 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 NCEH1Q6PIU2 408 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 LINGO4Q6UY18 593 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 DRC7Q8IY82 874 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 OR7D4Q8NG98 312 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 OR2I1PQ8NGU4 316 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 ORAI3Q9BRQ5 295 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 PARVAQ9NVD7 372 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 SARDHQ9UL12 918 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 SLCO1B1Q9Y6L6 691 aa20.77■□□□□ 0.92
CLK3-225ENST00000569063 A0A1W2PQJ5 194 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 FAM47DPA6NHR8 397 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 TMCO5BA8MYB1 307 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 C1QTNF3-AMACRE9PGA6 284 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 GOLGA6L19H0YKK7 550 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 K7ERQ8 282 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 CBX4O00257 560 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 ZMPSTE24O75844 475 aa20.76■□□□□ 0.91
CLK3-225ENST00000569063 GLDCP23378 1020 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms