RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SMYD5Q6GMV2 418 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 CXorf57Q6NSI4 855 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 RRAGAQ7L523 313 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 SPACA3Q8IXA5 215 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 FMR1NBQ8N0W7 255 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 SLC25A45Q8N413 288 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 EHBP1Q8NDI1 1231 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 KAT5Q92993 513 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 FAM81BQ96LP2 452 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 RPRD1AQ96P16 312 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 DEPDC7Q96QD5 511 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 FEM1AQ9BSK4 669 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 ASNSD1Q9NWL6 643 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 SARDHQ9UL12 918 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
HERPUD1-215ENST00000568676 MYLKQ15746 1914 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 NEMP2A6NFY4 417 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 E5RJQ4 531 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 TRIM38O00635 465 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 SDC3O75056 442 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 CLDN11O75508 207 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 THEGLP0DJG4 465 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 CKMT1AP12532 417 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 PLA2G2AP14555 144 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 DGKAP23743 735 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 AKT2P31751 481 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 DUSP3P51452 185 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 ERVPABLB-1P60509 514 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 KRT83P78385 493 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 ZNF177Q13360 481 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 DLG2Q15700 870 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 KDM7AQ6ZMT4 941 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 ENOSF1Q7L5Y1 443 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 DCP2Q8IU60 420 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 ZNF843Q8N446 348 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 SH2D3CQ8N5H7 860 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 ALG14Q96F25 216 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 DUSP23Q9BVJ7 150 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 SRRTQ9BXP5 876 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 FAM204AQ9H8W3 233 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 TMEM51Q9NW97 253 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 HS3ST2Q9Y278 367 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 PTPRQQ9UMZ3 2332 aa16.18■□□□□ 0.18
HERPUD1-215ENST00000568676 BPTFQ12830 3046 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 GNA14O95837 355 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 KRT5P13647 590 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 HNRNPA2B1P22626 353 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 METAP1P53582 386 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 TMPRSS3P57727 454 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 SNX16P57768 344 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 CXADRP78310 365 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 CFHR1Q03591 330 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 CCDC173Q0VFZ6 552 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 EFHC1Q5JVL4 640 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 CDCP2Q5VXM1 449 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 FBXL22Q6P050 247 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 ARHGEF19Q8IW93 802 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 FAM181AQ8N9Y4 354 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 TMIEQ8NEW7 156 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 ZNF606Q8WXB4 792 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 COL26A1Q96A83 441 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 GRAMD1AQ96CP6 724 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 TIGD1Q96MW7 591 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 C2orf49Q9BVC5 232 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 DYRK4Q9NR20 520 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 DDIT4Q9NX09 232 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 NLGN3Q9NZ94 848 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 VPS28Q9UK41 221 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 TBC1D30Q9Y2I9 924 aa16.17■□□□□ 0.18
HERPUD1-215ENST00000568676 BICDL2A1A5D9 508 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 GOLGA6L4A6NEF3 574 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 LZTS3O60299 673 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 OPA1O60313 960 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 HSF2BPO75031 334 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 LETM1O95202 739 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 PRNPP04156 253 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 LSSP48449 732 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 CLCN6P51797 869 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 CDH4P55283 916 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 PDCLQ13371 301 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 AUHQ13825 339 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 C5orf22Q49AR2 442 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 PIP5KL1Q5T9C9 394 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 DENND1BQ6P3S1 775 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 Q6ZVU0 165 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 ZSCAN30Q86W11 494 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 HORMAD1Q86X24 394 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 KREMEN1Q96MU8 473 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 SLC2A13Q96QE2 648 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 DPH1Q9BZG8 443 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 NCKIPSDQ9NZQ3 722 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 OR51B4Q9Y5P0 310 aa16.16■□□□□ 0.18
HERPUD1-215ENST00000568676 ARID1BQ8NFD5 2236 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 A0A1W2PQU0 124 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 PIAS2O75928 621 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms