RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SYKP43405 635 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 NUMBP49757 651 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 PLK1P53350 603 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 TAS2R38P59533 333 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 LRMPQ12912 555 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 ISXQ2M1V0 245 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 NEK5Q6P3R8 708 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 INO80CQ6PI98 192 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 BEND5Q7L4P6 421 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 MAPK15Q8TD08 544 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 ERCC4Q92889 916 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 GRAMD1AQ96CP6 724 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 IFT43Q96FT9 208 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 CALN1Q9BXU9 219 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC25A13Q9UJS0 675 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 SATB2Q9UPW6 733 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 LY6G6EA0A0G2JKS1 128 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 K7ESM1 405 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 SCAMP1O15126 338 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC16A3O15427 465 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 HNRNPA2B1P22626 353 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 SKOR1P84550 965 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 CCDC15Q0P6D6 951 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 ZC3H12AQ5D1E8 599 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 C3orf38Q5JPI3 329 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 RABGAP1LQ5R372 815 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 PIP5KL1Q5T9C9 394 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 CXorf57Q6NSI4 855 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 Q6ZVU0 165 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 CIR1Q86X95 450 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 OR13H1Q8NG92 308 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 OSBPL2Q9H1P3 480 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 ST7Q9NRC1 585 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 NCKIPSDQ9NZQ3 722 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC12A6Q9UHW9 1150 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 PCDHB4Q9Y5E5 795 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 PCDHGA8Q9Y5G5 932 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 U3KQA8 63 aa12.13□□□□□ -0.47
GTF3C1-209ENST00000568569 KCNU1A8MYU2 1149 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 MYF5P13349 255 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 ACADSBP45954 432 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 RPL34P49207 117 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 DLG2Q15700 870 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 SYPL2Q5VXT5 272 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 ZCCHC8Q6NZY4 707 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 ABI3BPQ7Z7G0 1075 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 HORMAD1Q86X24 394 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 SMYD4Q8IYR2 804 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC22A18ASQ8N1D0 253 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 ATP6V0D2Q8N8Y2 350 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 FAM174AQ8TBP5 190 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 KLK6Q92876 244 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 RNF34Q969K3 372 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 ALG14Q96F25 216 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 NT5C1BQ96P26 610 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 PRMT1Q99873 361 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 DNAJC28Q9NX36 388 aa12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-209ENST00000568569 PTPN13Q12923 2485 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 A6NNZ2 444 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 RNF225M0QZC1 329 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 BNIP3LO60238 219 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 NEBLO76041 1014 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 IGLV3-25P01717 112 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC2A3P11169 496 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 TGM2P21980 687 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 CSRP3P50461 194 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 NDUFA8P51970 172 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 CLDN2P57739 230 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 ZNF177Q13360 481 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 KIAA1614Q5VZ46 1190 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 CCDC81Q6ZN84 652 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 GCNT7Q6ZNI0 430 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 ARL14Q8N4G2 192 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 ZNF548Q8NEK5 533 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 SLC35C1Q96A29 364 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 ATXN7L3BQ96GX2 97 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
GTF3C1-209ENST00000568569 TSG101Q99816 390 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms