RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ZCCHC9Q8N567 271 aaKnown RBP25.81■■□□□ 1.72
FANCA-228ENST00000567943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.81■■□□□ 1.72
FANCA-228ENST00000567943 BTBD1Q9H0C5 482 aa25.81■■□□□ 1.72
FANCA-228ENST00000567943 MUC3BQ9H195 1237 aa25.81■■□□□ 1.72
FANCA-228ENST00000567943 PCED1AQ9H1Q7 454 aa25.81■■□□□ 1.72
FANCA-228ENST00000567943 EIF2B4Q9UI10 523 aaKnown RBP25.81■■□□□ 1.72
FANCA-228ENST00000567943 VPS28Q9UK41 221 aa25.81■■□□□ 1.72
FANCA-228ENST00000567943 PCNX2A6NKB5 2137 aa25.81■■□□□ 1.72
FANCA-228ENST00000567943 C10orf142B7Z368 130 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ARHGAP33O14559 1287 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ATP9BO43861 1147 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 SNAP91O60641 907 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 SEMA4FO95754 770 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 MT-CO1P00395 513 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 PLEKP08567 350 aaPredicted RBP25.8■■□□□ 1.72
FANCA-228ENST00000567943 ADRB1P08588 477 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 OGDHQ02218 1023 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 UAP1L1Q3KQV9 507 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 TTC31Q49AM3 519 aaPredicted RBP25.8■■□□□ 1.72
FANCA-228ENST00000567943 DAB2IPQ5VWQ8 1189 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 SCYL2Q6P3W7 929 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 USP30Q70CQ3 517 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 AADATQ8N5Z0 425 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ZNF653Q96CK0 615 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ORAI3Q9BRQ5 295 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ZYG11BQ9C0D3 744 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 OSBPL2Q9H1P3 480 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 FBXL12Q9NXK8 326 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 CNOT8Q9UFF9 292 aaKnown RBP25.8■■□□□ 1.72
FANCA-228ENST00000567943 OR12D3Q9UGF7 316 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ADAMTS1Q9UHI8 967 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 SCML1Q9UN30 329 aa25.8■■□□□ 1.72
FANCA-228ENST00000567943 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.8■■□□□ 1.72
FANCA-228ENST00000567943 PLXNA2O75051 1894 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 A0A1W2PP55 124 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 FAM72CH0Y354 149 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 GIPC1O14908 333 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 OR1E1P30953 314 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 SLC8A1P32418 973 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 NNMTP40261 264 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 METAP1P53582 386 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 FAM72AQ5TYM5 149 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 MANEALQ5VSG8 457 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 FAM72DQ6L9T8 149 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 TMC6Q7Z403 805 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 SETD3Q86TU7 594 aaPredicted RBP25.79■■□□□ 1.72
FANCA-228ENST00000567943 VPS36Q86VN1 386 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 FAM72BQ86X60 149 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 SH2D3CQ8N5H7 860 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 NTAN1Q96AB6 310 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 BIRC7Q96CA5 298 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 GTPBP2Q9BX10 602 aaKnown RBP25.79■■□□□ 1.72
FANCA-228ENST00000567943 ISCUQ9H1K1 167 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 MIR1-1HGQ9H1L0 117 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 NEUROG2Q9H2A3 272 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 SGK2Q9HBY8 427 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 PPARGC1AQ9UBK2 798 aaKnown RBP25.79■■□□□ 1.72
FANCA-228ENST00000567943 SUSD2Q9UGT4 822 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 HS3ST2Q9Y278 367 aa25.79■■□□□ 1.72
FANCA-228ENST00000567943 A0A1B0GTW7 788 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 RNASEH1O60930 286 aaKnown RBP25.78■■□□□ 1.72
FANCA-228ENST00000567943 GNSP15586 552 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 DESP17661 470 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 KCNA4P22459 653 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 PSMD8P48556 350 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 BNC1Q01954 994 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 NRG1Q02297 640 aaPredicted RBP25.78■■□□□ 1.72
FANCA-228ENST00000567943 ELAVL3Q14576 367 aaKnown RBP25.78■■□□□ 1.72
FANCA-228ENST00000567943 DLG2Q15700 870 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 C6orf118Q5T5N4 469 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 N4BP2L1Q5TBK1 243 aaPredicted RBP25.78■■□□□ 1.72
FANCA-228ENST00000567943 SPECC1LQ69YQ0 1117 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 SLFN11Q7Z7L1 901 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 MINDY1Q8N5J2 469 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 MYO1AQ9UBC5 1043 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 VPS51Q9UID3 782 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 SLC25A13Q9UJS0 675 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 SARDHQ9UL12 918 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 NEU3Q9UQ49 428 aa25.78■■□□□ 1.72
FANCA-228ENST00000567943 DOCK9Q9BZ29 2069 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 K7ERQ8 282 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 BCAT2O15382 392 aaPredicted RBP25.77■■□□□ 1.72
FANCA-228ENST00000567943 IGHV4-34P06331 123 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 SRCP12931 536 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 GLDCP23378 1020 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 PSMA2P25787 234 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 GALCP54803 685 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 GRIK2Q13002 908 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 PSAPL1Q6NUJ1 521 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 RWDD4Q6NW29 188 aaKnown RBP25.77■■□□□ 1.72
FANCA-228ENST00000567943 OR7D4Q8NG98 312 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 TRIM11Q96F44 468 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 TMEM131Q92545 1883 aa25.77■■□□□ 1.72
FANCA-228ENST00000567943 TMEM191CA6NGB0 347 aa25.76■■□□□ 1.71
FANCA-228ENST00000567943 SMAD6O43541 496 aaKnown RBP25.76■■□□□ 1.71
FANCA-228ENST00000567943 GJB3O75712 270 aa25.76■■□□□ 1.71
FANCA-228ENST00000567943 LRIG2O94898 1065 aa25.76■■□□□ 1.71
FANCA-228ENST00000567943 MYBL1P10243 752 aa25.76■■□□□ 1.71
FANCA-228ENST00000567943 SCAPQ12770 1279 aa25.76■■□□□ 1.71
FANCA-228ENST00000567943 SEMA3BQ13214 749 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms