RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 WFIKKN2Q8TEU8 576 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 RBM41Q96IZ5 413 aaKnown RBP12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CARD9Q9H257 536 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 ETNK2Q9NVF9 386 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 HCN2Q9UL51 889 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 MRPS17Q9Y2R5 130 aaKnown RBP12.93□□□□□ -0.34
SF3B3-206ENST00000565990 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 MUC3AQ02505 3323 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 TECTAO75443 2155 aa12.93□□□□□ -0.34
SF3B3-206ENST00000565990 hCG_1818297A0A087WSY0 165 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 PRRT4C9JH25 899 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 KDELR3O43731 214 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 APODP05090 189 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 PABPC1P11940 636 aaKnown RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 ZFXP17010 805 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 CD72P21854 359 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 MZF1P28698 734 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 ADCY2Q08462 1091 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 GRSF1Q12849 480 aaKnown RBP eCLIP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 TFDP2Q14188 446 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 POLD3Q15054 466 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 EIF4HQ15056 248 aaKnown RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 PLEKHG6Q3KR16 790 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 PITRM1Q5JRX3 1037 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 RNF219Q5W0B1 726 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 ALS2CLQ60I27 953 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 NCBP2-AS2Q69YL0 99 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 NUDT18Q6ZVK8 323 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 AHI1Q8N157 1196 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 SIX5Q8N196 739 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 SYNPOQ8N3V7 929 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 PLD5Q8N7P1 536 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 TERB1Q8NA31 727 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 ARHGEF2Q92974 986 aaKnown RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 CAVIN3Q969G5 261 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 CLDN23Q96B33 292 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 OSBPL9Q96SU4 736 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 PSMB7Q99436 277 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 MAK16Q9BXY0 300 aaKnown RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 SLC39A8Q9C0K1 460 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 ABCB8Q9NUT2 735 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 NYNRINQ9P2P1 1898 aaKnown RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 GGA2Q9UJY4 613 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 HPCAL4Q9UM19 191 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 MTF2Q9Y483 593 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-206ENST00000565990 RAD54BQ9Y620 910 aa12.92□□□□□ -0.34
SF3B3-206ENST00000565990 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ENC1O14682 589 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 OPA1O60313 960 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ZMPSTE24O75844 475 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 EGFP01133 1207 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 RHOCP08134 193 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 KRT10P13645 584 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ETFBP38117 255 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 CSKP41240 450 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-206ENST00000565990 SLC10A2Q12908 348 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-206ENST00000565990 SERINC3Q13530 473 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ENPP2Q13822 863 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 PARP15Q460N3 678 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 FBXO43Q4G163 708 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 DGKKQ5KSL6 1271 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 BBS12Q6ZW61 710 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 LRRC49Q8IUZ0 686 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 SFTPA1Q8IWL2 248 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 NPWQ8N729 165 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 KDM1BQ8NB78 822 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 CCDC26Q8TAB7 109 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ACDQ96AP0 544 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 OSBPL8Q9BZF1 889 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 LTB4R2Q9NPC1 389 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 MFHAS1Q9Y4C4 1052 aa12.91□□□□□ -0.34
SF3B3-206ENST00000565990 FAM170BA6NMN3 283 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 RASA4BC9J798 803 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 GOLGA8KD6RF30 607 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 TNFRSF10AO00220 468 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 RASA4O43374 803 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 CST8O60676 142 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 RAMP2O60895 175 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 CD160O95971 181 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 ACVRL1P37023 503 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 CETN2P41208 172 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 NR2C2P49116 596 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 PAPOLAP51003 745 aaKnown RBP12.9□□□□□ -0.34
SF3B3-206ENST00000565990 KDSRQ06136 332 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 SULT2A1Q06520 285 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 SLC20A2Q08357 652 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 GALNT2Q10471 571 aa12.9□□□□□ -0.34
SF3B3-206ENST00000565990 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms