RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 KLK13Q9UKR3 277 aa20.4■□□□□ 0.86
CLN6-206ENST00000565471 PPM1HQ9ULR3 514 aa20.4■□□□□ 0.86
CLN6-206ENST00000565471 APOBEC2Q9Y235 224 aaKnown RBP20.4■□□□□ 0.86
CLN6-206ENST00000565471 SIK3Q9Y2K2 1263 aa20.4■□□□□ 0.86
CLN6-206ENST00000565471 USP24Q9UPU5 2620 aa20.4■□□□□ 0.86
CLN6-206ENST00000565471 TMEM131Q92545 1883 aa20.39■□□□□ 0.86
CLN6-206ENST00000565471 C1QTNF3-AMACRE9PGA6 284 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 EPHB6O15197 1021 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 PCDHGA12O60330 932 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 ZNF18P17022 549 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 MMP8P22894 467 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 C21orf59P57076 290 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 FMO1Q01740 532 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 KCNT1Q5JUK3 1230 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 C6orf118Q5T5N4 469 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 SASS6Q6UVJ0 657 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 TRIM72Q6ZMU5 477 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 Q6ZVU0 165 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 DCAF4L2Q8NA75 395 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 ANKRD20A12PQ8NF67 263 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 CDC6Q99741 560 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 SNX10Q9Y5X0 201 aa20.39■□□□□ 0.85
CLN6-206ENST00000565471 FAM170AA1A519 330 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 E9PAM4 449 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 H0Y8X5 98 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 GOLGA6L22H0YM25 854 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 LATO43561 262 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 ENDOD1O94919 500 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 SRCP12931 536 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 CHRNB2P17787 502 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 STAT1P42224 750 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 COPB1P53618 953 aaKnown RBP20.38■□□□□ 0.85
CLN6-206ENST00000565471 MYL5Q02045 173 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 STX1AQ16623 288 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 ARTNQ5T4W7 220 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.38■□□□□ 0.85
CLN6-206ENST00000565471 ZNF783Q6ZMS7 281 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 CHCHD4Q8N4Q1 142 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 RHBDD1Q8TEB9 315 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 NLRC4Q9NPP4 1024 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 METTL5Q9NRN9 209 aaKnown RBP20.38■□□□□ 0.85
CLN6-206ENST00000565471 TMPRSS4Q9NRS4 437 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 MPP6Q9NZW5 540 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 LIMA1Q9UHB6 759 aaKnown RBP20.38■□□□□ 0.85
CLN6-206ENST00000565471 VPS51Q9UID3 782 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 SARDHQ9UL12 918 aa20.38■□□□□ 0.85
CLN6-206ENST00000565471 KNL1Q8NG31 2342 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3DA0A087WVF3 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3IA0A087WXS9 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3EA0A087X179 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3KA0A087X1G2 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3FA6NER0 549 aaPredicted RBP20.37■□□□□ 0.85
CLN6-206ENST00000565471 LGALS16A8MUM7 142 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3LB9A6J9 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 PLRG1O43660 514 aaKnown RBP20.37■□□□□ 0.85
CLN6-206ENST00000565471 SNAP91O60641 907 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3HP0C7X1 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 CD38P28907 300 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 NUDT1P36639 197 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 CLCN6P51797 869 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 METAP1P53582 386 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3GQ6DHY5 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3CQ6IPX1 549 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TFAP2DQ7Z6R9 452 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 FAM131BQ86XD5 332 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TBC1D3Q8IZP1 549 aaPredicted RBP20.37■□□□□ 0.85
CLN6-206ENST00000565471 PIP4K2CQ8TBX8 421 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 CCDC114Q96M63 670 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 AASDHPPTQ9NRN7 309 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 ZNF212Q9UDV6 495 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 DOCK4Q8N1I0 1966 aa20.37■□□□□ 0.85
CLN6-206ENST00000565471 TP53BP1Q12888 1972 aaPredicted RBP20.36■□□□□ 0.85
CLN6-206ENST00000565471 A0A0D9SEW6 157 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 A0A1B0GTQ1 180 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 A0A1W2PR77 199 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 ILVBLA1L0T0 632 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 RTN2O75298 545 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 MT-CO1P00395 513 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 WNT1P04628 370 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 UNGP13051 313 aaPredicted RBP20.36■□□□□ 0.85
CLN6-206ENST00000565471 OR1E1P30953 314 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 GRK6P43250 576 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 PPP2CBP62714 309 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 PPP2CAP67775 309 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 CNTN1Q12860 1018 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 SYCP1Q15431 976 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 SLC45A4Q5BKX6 768 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 AGBL4Q5VU57 503 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 EMC1Q8N766 993 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 ATP11CQ8NB49 1132 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 SERAC1Q96JX3 654 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 ZYG11BQ9C0D3 744 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 PPARGC1AQ9UBK2 798 aaKnown RBP20.36■□□□□ 0.85
CLN6-206ENST00000565471 FARP1Q9Y4F1 1045 aaPredicted RBP20.36■□□□□ 0.85
CLN6-206ENST00000565471 CABIN1Q9Y6J0 2220 aa20.36■□□□□ 0.85
CLN6-206ENST00000565471 LRRC10BA6NIK2 292 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 PLK4O00444 970 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 KCNK3O14649 394 aa20.35■□□□□ 0.85
CLN6-206ENST00000565471 SRGAP2O75044 1071 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms