RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLITRK6Q9H5Y7 841 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CD248Q9HCU0 757 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 KRT82Q9NSB4 513 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ABI2Q9NYB9 513 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 DOCK3Q8IZD9 2030 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 A0A0A0MRY4 1105 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CXorf49A8MYA2 514 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 TEX46H3BTG2 121 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SMIM10L2AP0DMW4 78 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SMIM10L2BP0DMW5 78 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 NAT2P11245 290 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 XPAP23025 273 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 GRK2P25098 689 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DNAJB1P25685 340 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SERPINB5P36952 375 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 KPNB1Q14974 876 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 NFIL3Q16649 462 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DNAL1Q4LDG9 190 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MFSD14CQ5VZR4 134 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PCYOX1LQ8NBM8 494 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PARK7Q99497 189 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 CAPS2Q9BXY5 557 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DYRK4Q9NR20 520 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SYCE1LA8MT33 242 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PSMD11O00231 422 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MT-CYBP00156 380 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 MAPK10P53779 464 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SF3B4Q15427 424 aaKnown RBP eCLIP3.42□□□□□ -1.863e-6■■■■□ 23.3
CHD9-213ENST00000564845 ARMC12Q5T9G4 340 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SLC25A41Q8N5S1 370 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 KCNV2Q8TDN2 545 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SOCS4Q8WXH5 440 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SPATA5L1Q9BVQ7 753 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MROH8Q9H579 483 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PDZD7Q9H5P4 517 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DPP3Q9NY33 737 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SLC4A7Q9Y6M7 1214 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TRIP11Q15643 1979 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MOXD2PA6NHM9 499 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TSPAN1O60635 241 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RNASEH1O60930 286 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 CDH16O75309 829 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ENO2P09104 434 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 CPB1P15086 417 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ETV6P41212 452 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RGS4P49798 205 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DCTN2Q13561 401 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 C1DQ13901 141 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 ANGPT1Q15389 498 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 KCNA10Q16322 511 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 NFE2Q16621 373 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 PPM1JQ5JR12 505 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 VWA5B1Q5TIE3 1220 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ZCCHC8Q6NZY4 707 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.42□□□□□ -1.861e-6■■■□□ 16.2
CHD9-213ENST00000564845 TNS4Q8IZW8 715 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 AGGF1Q8N302 714 aaeCLIP3.42□□□□□ -1.865e-8■■■■□ 20.3
CHD9-213ENST00000564845 B3GALNT2Q8NCR0 500 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 JADE3Q92613 823 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CDC42EP4Q9H3Q1 356 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 DHX33Q9H6R0 707 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 GMIPQ9P107 970 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CACFD1Q9UGQ2 172 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 I6L893 689 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 NRP1O14786 923 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SUPT3HO75486 399 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 B3GAT3O94766 335 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CHN1P15882 459 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RBL1P28749 1068 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 STIP1P31948 543 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 GSTM5P46439 218 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 OR1G1P47890 313 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 INPP1P49441 399 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CDH6P55285 790 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PLIN5Q00G26 463 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 GBE1Q04446 702 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TBL3Q12788 808 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 TCHHL1Q5QJ38 904 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 ZFP1Q6P2D0 407 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 NIPA1Q7RTP0 329 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SPATA22Q8NHS9 363 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 BBS4Q96RK4 519 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RIT2Q99578 217 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 NLNQ9BYT8 704 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MRPL46Q9H2W6 279 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 SAYSD1Q9NPB0 183 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ASNSD1Q9NWL6 643 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PCDHGB4Q9UN71 923 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ADGRG4Q8IZF6 3080 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DFFAO00273 331 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 XPO1O14980 1071 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 TSPAN9O75954 239 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PCNAP12004 261 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 IFNGR2P38484 337 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 GUCA1AP43080 201 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 HNMTP50135 292 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CCNHP51946 323 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 ADIGQ0VDE8 80 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 DLG2Q15700 870 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms