RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PSMB7Q99436 277 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 OMDQ99983 421 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 SPON2Q9BUD6 331 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 MIR1-1HGQ9H1L0 117 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 PCED1AQ9H1Q7 454 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 RETREG1Q9H6L5 497 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 SGK2Q9HBY8 427 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 TMEM9BQ9NQ34 198 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 FBXL12Q9NXK8 326 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 VPS51Q9UID3 782 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 CAPN11Q9UMQ6 739 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 LUC7L2Q9Y383 392 aaKnown RBP18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 GON4LQ3T8J9 2241 aa18.81■□□□□ 0.6
SYNGR3-204ENST00000564642 ADAMTS9Q9P2N4 1935 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 A0A0D9SEW6 157 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 C4orf47A7E2U8 309 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 MID1O15344 667 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 ATMINO43313 823 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 SNAP91O60641 907 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 SEMA4FO95754 770 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 IL1BP01584 269 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 VAV1P15498 845 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 ENGP17813 658 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 PSMD8P48556 350 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 ATXN3P54252 364 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 EFHC2Q5JST6 749 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 ARTNQ5T4W7 220 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 DAB2IPQ5VWQ8 1189 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 PLEKHA7Q6IQ23 1121 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 TMC6Q7Z403 805 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 DSG4Q86SJ6 1040 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 DNAAF5Q86Y56 855 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 DCAF4L2Q8NA75 395 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 DNASE2BQ8WZ79 361 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 OR8D1Q8WZ84 308 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 SNX19Q92543 992 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 TBC1D31Q96DN5 1066 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 TRIM11Q96F44 468 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 MAGEB5Q9BZ81 275 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 XPO4Q9C0E2 1151 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 ATP13A1Q9HD20 1204 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 CNOT8Q9UFF9 292 aaKnown RBP18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 HS3ST2Q9Y278 367 aa18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 FARP1Q9Y4F1 1045 aaPredicted RBP18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.8■□□□□ 0.6
SYNGR3-204ENST00000564642 CEP250Q9BV73 2442 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 A0A1W2PP55 124 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 FAM72CH0Y354 149 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 CBX4O00257 560 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 CBFA2T2O43439 604 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 BNIP3LO60238 219 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 RNASEH2AO75792 299 aaKnown RBP18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 LRIG2O94898 1065 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 ADH1BP00325 375 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 SERPING1P05155 500 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 RHOQP17081 205 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 C5AR1P21730 350 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 PSMA2P25787 234 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 AIF1P55008 147 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 GNA12Q03113 381 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 SCAPQ12770 1279 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 FAM72AQ5TYM5 149 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 MANEALQ5VSG8 457 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 FAM72DQ6L9T8 149 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 RETSATQ6NUM9 610 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 FAM72BQ86X60 149 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 OR7D4Q8NG98 312 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 ZNF653Q96CK0 615 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 CCDC114Q96M63 670 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 NEUROG2Q9H2A3 272 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 C6orf106Q9H6K1 298 aaPredicted RBP18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 ZNF212Q9UDV6 495 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 ADAMTS1Q9UHI8 967 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 SCINQ9Y6U3 715 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 DMXL1Q9Y485 3027 aa18.79■□□□□ 0.6
SYNGR3-204ENST00000564642 A0A1B0GTW7 788 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 CDX4O14627 284 aaPredicted RBP18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 RNF8O76064 485 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 MT-CO1P00395 513 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 SYPP08247 313 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 MYBL1P10243 752 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 SRCP12931 536 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 L1CAMP32004 1257 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 ETFBP38117 255 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 MAPK8P45983 427 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 MAPKAPK2P49137 400 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 OGDHQ02218 1023 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 NUMA1Q14980 2115 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 FAM46CQ5VWP2 391 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 LINGO4Q6UY18 593 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 Q6ZVU0 165 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 HDDC3Q8N4P3 179 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 GTPBP2Q9BX10 602 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 ISCUQ9H1K1 167 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 MRPL47Q9HD33 250 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 TMEM248Q9NWD8 314 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 MYO1AQ9UBC5 1043 aa18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 EIF2B4Q9UI10 523 aaKnown RBP18.78■□□□□ 0.6
SYNGR3-204ENST00000564642 DNAI1Q9UI46 699 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms