RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 NRG1Q02297 640 aaPredicted RBP31.51■■■□□ 2.63
CMTM4-204ENST00000563952 GFPT1Q06210 699 aaPredicted RBP31.51■■■□□ 2.63
CMTM4-204ENST00000563952 MANEALQ5VSG8 457 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 USP30Q70CQ3 517 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 SH2D3CQ8N5H7 860 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 DCAF4L2Q8NA75 395 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 TSPY26PQ9H489 355 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 SERGEFQ9UGK8 458 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 SUSD2Q9UGT4 822 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 ADAMTS9Q9P2N4 1935 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 A0A1W2PP55 124 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 ILVBLA1L0T0 632 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 BNIP3LO60238 219 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 RNASEH2AO75792 299 aaKnown RBP31.5■■■□□ 2.63
CMTM4-204ENST00000563952 MT-CO1P00395 513 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 IL1BP01584 269 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 GZMAP12544 262 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 KCNA4P22459 653 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 SFSWAPQ12872 951 aaKnown RBP31.5■■■□□ 2.63
CMTM4-204ENST00000563952 LINGO4Q6UY18 593 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 Q6ZVU0 165 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 ATP11CQ8NB49 1132 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 TBC1D31Q96DN5 1066 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 OMDQ99983 421 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 XPO4Q9C0E2 1151 aaKnown RBP31.5■■■□□ 2.63
CMTM4-204ENST00000563952 PCED1AQ9H1Q7 454 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 SGK2Q9HBY8 427 aa31.5■■■□□ 2.63
CMTM4-204ENST00000563952 CBX4O00257 560 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 RTN2O75298 545 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 LRIG2O94898 1065 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 SRCP12931 536 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 GLDCP23378 1020 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 ZBED6P86452 979 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 EFHC2Q5JST6 749 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 PLEKHA7Q6IQ23 1121 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 ZNF783Q6ZMS7 281 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 TMC6Q7Z403 805 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 PYROXD2Q8N2H3 581 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 ZCCHC9Q8N567 271 aaKnown RBP31.49■■■□□ 2.63
CMTM4-204ENST00000563952 DNASE2BQ8WZ79 361 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 OR8D1Q8WZ84 308 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 ZNF653Q96CK0 615 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP31.49■■■□□ 2.63
CMTM4-204ENST00000563952 GTPBP2Q9BX10 602 aaKnown RBP31.49■■■□□ 2.63
CMTM4-204ENST00000563952 CAPN10Q9HC96 672 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 ATP13A1Q9HD20 1204 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 EIF2B4Q9UI10 523 aaKnown RBP31.49■■■□□ 2.63
CMTM4-204ENST00000563952 CAPN11Q9UMQ6 739 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 HS3ST2Q9Y278 367 aa31.49■■■□□ 2.63
CMTM4-204ENST00000563952 FAM47DPA6NHR8 397 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 K7ERQ8 282 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 CDX4O14627 284 aaPredicted RBP31.48■■■□□ 2.63
CMTM4-204ENST00000563952 ADH1BP00325 375 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 TPM3P06753 285 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 RHOQP17081 205 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 PSMA2P25787 234 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 GNA12Q03113 381 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 SCAPQ12770 1279 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 UAP1L1Q3KQV9 507 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 HGSNATQ68CP4 663 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 HDDC3Q8N4P3 179 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 SYN2Q92777 582 aaPredicted RBP31.48■■■□□ 2.63
CMTM4-204ENST00000563952 IQCDQ96DY2 449 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 NEUROG2Q9H2A3 272 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 CNOT8Q9UFF9 292 aaKnown RBP31.48■■■□□ 2.63
CMTM4-204ENST00000563952 DNAI1Q9UI46 699 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 LAMA1P25391 3075 aa31.48■■■□□ 2.63
CMTM4-204ENST00000563952 FSBPO95073 299 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 C5AR1P21730 350 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 ATXN3P54252 364 aaPredicted RBP31.47■■■□□ 2.63
CMTM4-204ENST00000563952 DAB2IPQ5VWQ8 1189 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 DSG4Q86SJ6 1040 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 AADATQ8N5Z0 425 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 NDFIP2Q9NV92 336 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 NEU3Q9UQ49 428 aa31.47■■■□□ 2.63
CMTM4-204ENST00000563952 LUC7L2Q9Y383 392 aaKnown RBP31.47■■■□□ 2.63
CMTM4-204ENST00000563952 BZW2Q9Y6E2 419 aaKnown RBP31.47■■■□□ 2.63
CMTM4-204ENST00000563952 MED19A0JLT2 244 aaPredicted RBP31.46■■■□□ 2.63
CMTM4-204ENST00000563952 GYPCP04921 128 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 FOXK2Q01167 660 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 PPM1JQ5JR12 505 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 NLRP14Q86W24 1093 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 TMEM248Q9NWD8 314 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 MYO1AQ9UBC5 1043 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 FZD10Q9ULW2 581 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 ZBTB32Q9Y2Y4 487 aaPredicted RBP31.46■■■□□ 2.63
CMTM4-204ENST00000563952 DNAH14Q0VDD8 3507 aa31.46■■■□□ 2.63
CMTM4-204ENST00000563952 PCDH15Q96QU1 1955 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 A0A1B0GTW7 788 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 TM4SF5O14894 197 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 SMAD6O43541 496 aaKnown RBP31.45■■■□□ 2.63
CMTM4-204ENST00000563952 SERPING1P05155 500 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 MAPKAPK2P49137 400 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 RETSATQ6NUM9 610 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 VPS36Q86VN1 386 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 RNF214Q8ND24 703 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 TRIM11Q96F44 468 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 ADAMTS1Q9UHI8 967 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 FZD4Q9ULV1 537 aa31.45■■■□□ 2.63
CMTM4-204ENST00000563952 ARHGAP33O14559 1287 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms