RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 FAM153CQ494X1 144 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 TEX44Q53QW1 395 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 MPP7Q5T2T1 576 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 RNASEH2BQ5TBB1 312 aaKnown RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 RNF219Q5W0B1 726 aaPredicted RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 TIGD7Q6NT04 549 aaPredicted RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 RHBDF2Q6PJF5 856 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 ZNF354CQ86Y25 554 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 MFN1Q8IWA4 741 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 KIAA1958Q8N8K9 716 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 BBOF1Q8ND07 529 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 FBXO25Q8TCJ0 367 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 BPIFB1Q8TDL5 484 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 AENQ8WTP8 325 aaKnown RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 CPT1BQ92523 772 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 MAML1Q92585 1016 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 IRF7Q92985 503 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 OTUB2Q96DC9 234 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 IL12RB2Q99665 862 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 FERMT1Q9BQL6 677 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 SPHK2Q9NRA0 654 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 OBP2AQ9NY56 170 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 FAM153AQ9UHL3 310 aa10.39□□□□□ -0.75
SMG1-208ENST00000563448 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
SMG1-208ENST00000563448 SLC9A3R1O14745 358 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 ZBTB24O43167 697 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 MTSS1O43312 755 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 STK10O94804 968 aaKnown RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 PENKP01210 267 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 JCHAINP01591 159 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 CYBBP04839 570 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 CCNB1P14635 433 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 GLDCP23378 1020 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 MZF1P28698 734 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 CD68P34810 354 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 IFI35P80217 286 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 IL10RBQ08334 325 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 FAXCQ5TGI0 409 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 TANGO2Q6ICL3 276 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 C4orf22Q6V702 233 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 PID1Q7Z2X4 250 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 CNTD1Q8N815 330 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 SMRP1Q8NCR6 262 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 OSCP1Q8WVF1 389 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 HNRNPLLQ8WVV9 542 aaKnown RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 MYLIPQ8WY64 445 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 FATE1Q969F0 183 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ASIC4Q96FT7 647 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ZNF419Q96HQ0 510 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 VAT1Q99536 393 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ACE2Q9BYF1 805 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 PLA2G2FQ9BZM2 168 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 SP110Q9HB58 689 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 PDFQ9HBH1 243 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ETNK1Q9HBU6 452 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 DUS2Q9NX74 493 aaKnown RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 KLHL8Q9P2G9 620 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 ANAPC5Q9UJX4 755 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 MYO10Q9HD67 2058 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 TCRBV7S3A2A0A539 114 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 KDELR3O43731 214 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 PRAMEF11O60813 436 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 OPHN1O60890 802 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ERLIN1O75477 346 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 GBP2P32456 591 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 CSKP41240 450 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 BASP1P80723 227 aaKnown RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 CDH18Q13634 790 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 EML3Q32P44 896 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 LY6G5CQ5SRR4 150 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ANKRD22Q5VYY1 191 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 TRIM68Q6AZZ1 485 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ZNF783Q6ZMS7 281 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 LEKR1Q6ZMV7 388 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ARHGEF18Q6ZSZ5 1173 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 Q7L0L9 218 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 NAT8LQ8N9F0 302 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 FIBINQ8TAL6 211 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 SUSD6Q92537 303 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ALG14Q96F25 216 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 LMLNQ96KR4 655 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 TEKT5Q96M29 485 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 AGAP3Q96P47 875 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 GORASP1Q9BQQ3 440 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ZFP14Q9HCL3 533 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ATP13A1Q9HD20 1204 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 ARGLU1Q9NWB6 273 aaPredicted RBP10.38□□□□□ -0.75
SMG1-208ENST00000563448 MARK1Q9P0L2 795 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 IGSF9Q9P2J2 1179 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 CD207Q9UJ71 328 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 OR51B4Q9Y5P0 310 aa10.38□□□□□ -0.75
SMG1-208ENST00000563448 NEDD8-MDP1E9PL57 170 aa10.37□□□□□ -0.75
SMG1-208ENST00000563448 F5H423 210 aaPredicted RBP10.37□□□□□ -0.75
SMG1-208ENST00000563448 HLA-DQB2P05538 268 aa10.37□□□□□ -0.75
SMG1-208ENST00000563448 LAMP2P13473 410 aa10.37□□□□□ -0.75
SMG1-208ENST00000563448 PSMB4P28070 264 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms