RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OR52K2Q8NGK3 314 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 SLC46A2Q9BY10 475 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 XAB2Q9HCS7 855 aaKnown RBP18.43■□□□□ 0.54
COMMD4-208ENST00000563220 RBM22Q9NW64 420 aaKnown RBP eCLIP18.43■□□□□ 0.54
COMMD4-208ENST00000563220 PIH1D1Q9NWS0 290 aaKnown RBP18.43■□□□□ 0.54
COMMD4-208ENST00000563220 PCDHA11Q9Y5I1 949 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 MYO18AQ92614 2054 aaKnown RBP18.42■□□□□ 0.54
COMMD4-208ENST00000563220 MLNP12872 115 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 YBEYP58557 167 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-208ENST00000563220 SLC7A9P82251 487 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 PARP15Q460N3 678 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 DNAJC21Q5F1R6 531 aaKnown RBP18.42■□□□□ 0.54
COMMD4-208ENST00000563220 RABGAP1LQ5R372 815 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 Q6ZNB5 142 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 RTL10Q7L3V2 364 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 CROCCP2Q86T23 111 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.42■□□□□ 0.54
COMMD4-208ENST00000563220 FAM76AQ8TAV0 307 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 TLCD1Q96CP7 247 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 TCEAL4Q96EI5 215 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 OXNAD1Q96HP4 312 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-208ENST00000563220 ABHD8Q96I13 439 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 CCDC77Q9BR77 488 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 PLAC1Q9HBJ0 212 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 UBP1Q9NZI7 540 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 DNMT3BQ9UBC3 853 aaKnown RBP18.42■□□□□ 0.54
COMMD4-208ENST00000563220 CTNNAL1Q9UBT7 734 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 RABGEF1Q9UJ41 708 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 DOCK4Q8N1I0 1966 aa18.42■□□□□ 0.54
COMMD4-208ENST00000563220 A0A0D9SEW6 157 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 ERICH4A6NGS2 130 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 RGS16O15492 202 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-208ENST00000563220 SUN1O94901 812 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 AP2A1O95782 977 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 HLA-DQB2P05538 268 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 TSHRP16473 764 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 GCAP28676 217 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 NUMBP49757 651 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 SERINC3Q13530 473 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 TNFAIP8L3Q5GJ75 292 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 LRRC39Q96DD0 335 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 RETREG1Q9H6L5 497 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 GLOD4Q9HC38 313 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 USP12O75317 370 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 MOSPD3O75425 235 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 LATS1O95835 1130 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 C1RP00736 705 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 CKMP06732 381 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 EPHA5P54756 1037 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 MAGOHP61326 146 aaKnown RBP18.41■□□□□ 0.54
COMMD4-208ENST00000563220 HNRNPDQ14103 355 aaKnown RBP18.41■□□□□ 0.54
COMMD4-208ENST00000563220 RBM23Q86U06 439 aaKnown RBP18.41■□□□□ 0.54
COMMD4-208ENST00000563220 ZNF354CQ86Y25 554 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 KLHDC8BQ8IXV7 354 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 SPATA22Q8NHS9 363 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 SHKBP1Q8TBC3 707 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 FBF1Q8TES7 1133 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 ARHGEF2Q92974 986 aaKnown RBP18.41■□□□□ 0.54
COMMD4-208ENST00000563220 FATE1Q969F0 183 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 GCNAQ96QF7 691 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 FCRL5Q96RD9 977 aa18.41■□□□□ 0.54
COMMD4-208ENST00000563220 TRIM56Q9BRZ2 755 aaKnown RBP18.41■□□□□ 0.54
COMMD4-208ENST00000563220 NYNRINQ9P2P1 1898 aaKnown RBP18.4■□□□□ 0.54
COMMD4-208ENST00000563220 EXOC1LA0A1B0GW35 172 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 CLDN11O75508 207 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 PIAS1O75925 651 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 PTPN2P17706 415 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 PHBP35232 272 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 SESN2P58004 480 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-208ENST00000563220 SLC10A7Q0GE19 358 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 ANO4Q32M45 955 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 CYP4X1Q8N118 509 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 TTC16Q8NEE8 873 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 OR52K1Q8NGK4 314 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 CFAP36Q96G28 342 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 EBNA1BP2Q99848 306 aaKnown RBP18.4■□□□□ 0.54
COMMD4-208ENST00000563220 DDX50Q9BQ39 737 aaKnown RBP18.4■□□□□ 0.54
COMMD4-208ENST00000563220 PBX4Q9BYU1 374 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 SP110Q9HB58 689 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 EURLQ9NYK6 297 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 ZC3H7BQ9UGR2 993 aaKnown RBP18.4■□□□□ 0.54
COMMD4-208ENST00000563220 TTLL3Q9Y4R7 772 aa18.4■□□□□ 0.54
COMMD4-208ENST00000563220 RANBP2P49792 3224 aaKnown RBP18.4■□□□□ 0.54
COMMD4-208ENST00000563220 TRAV19A0A0A6YYK7 116 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.54
COMMD4-208ENST00000563220 GFRA2O00451 464 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 MT-CYBP00156 380 aaPredicted RBP18.39■□□□□ 0.54
COMMD4-208ENST00000563220 RHOP08100 348 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 MGAT1P26572 445 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 HOXA9P31269 272 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 MMP13P45452 471 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 RENBPP51606 427 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 GNA12Q03113 381 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 IL10RBQ08334 325 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 EFTUD2Q15029 972 aaKnown RBP eCLIP18.39■□□□□ 0.541e-7■■■■■ 52.3
COMMD4-208ENST00000563220 ZNF697Q5TEC3 545 aa18.39■□□□□ 0.54
COMMD4-208ENST00000563220 PDE12Q6L8Q7 609 aaKnown RBP18.39■□□□□ 0.54
COMMD4-208ENST00000563220 LEKR1Q6ZMV7 388 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms