RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 ACBD5Q5T8D3 534 aaPredicted RBP12.88□□□□□ -0.35
HERC2-202ENST00000562136 FAM46CQ5VWP2 391 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.88□□□□□ -0.35
HERC2-202ENST00000562136 C14orf80Q86SX3 495 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 MARCH9Q86YJ5 346 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 FAM71AQ8IYT1 594 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 TMEM145Q8NBT3 493 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 C1orf131Q8NDD1 294 aaKnown RBP12.88□□□□□ -0.35
HERC2-202ENST00000562136 RFFLQ8WZ73 363 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 OR8D1Q8WZ84 308 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 C1orf74Q96LT6 269 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
HERC2-202ENST00000562136 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 AASDHPPTQ9NRN7 309 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
HERC2-202ENST00000562136 IGLV3-10A0A075B6K4 115 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3DA0A087WVF3 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3IA0A087WXS9 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3EA0A087X179 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3KA0A087X1G2 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3FA6NER0 549 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3LB9A6J9 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 RTN2O75298 545 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 PAGE1O75459 146 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 LDOC1O95751 146 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 ITGAVP06756 1048 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3HP0C7X1 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 SNX16P57768 344 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 CYP4F3Q08477 520 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 CNTN1Q12860 1018 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 ZNF177Q13360 481 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 ILKQ13418 452 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 COL9A2Q14055 689 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 COL28A1Q2UY09 1125 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 SOWAHCQ53LP3 525 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3GQ6DHY5 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3CQ6IPX1 549 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 NEK5Q6P3R8 708 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 PDZD3Q86UT5 571 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 SLC47A2Q86VL8 602 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 TBC1D3Q8IZP1 549 aaPredicted RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 TMIEQ8NEW7 156 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 PIP4K2CQ8TBX8 421 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 CNDP2Q96KP4 475 aaKnown RBP12.87□□□□□ -0.35
HERC2-202ENST00000562136 PSMB7Q99436 277 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 PIGVQ9NUD9 493 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 ZNF212Q9UDV6 495 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 VANGL2Q9ULK5 521 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
HERC2-202ENST00000562136 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 FAM149AA5PLN7 773 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 PLK4O00444 970 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 MAGEC1O60732 1142 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 RFPL3O75679 317 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 GRAP2O75791 330 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 CNTN5O94779 1100 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 ADCY5O95622 1261 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 MT-CO1P00395 513 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 CTSLP07711 333 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 SRCP12931 536 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 BNIP3Q12983 259 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 MIIPQ5JXC2 388 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 PIP5KL1Q5T9C9 394 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 Q6ZVU0 165 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 ARCQ7LC44 396 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 SETD3Q86TU7 594 aaPredicted RBP12.86□□□□□ -0.35
HERC2-202ENST00000562136 PASD1Q8IV76 773 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 NAA15Q9BXJ9 866 aaKnown RBP12.86□□□□□ -0.35
HERC2-202ENST00000562136 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 CFAP46Q8IYW2 2715 aa12.86□□□□□ -0.35
HERC2-202ENST00000562136 C1QTNF3-AMACRE9PGA6 284 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 PRAMEF26H0Y7S4 382 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 M0QYT0 321 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 CBX4O00257 560 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 ZNF821O75541 412 aaPredicted RBP12.85□□□□□ -0.35
HERC2-202ENST00000562136 F9P00740 461 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 TFE3P19532 575 aaPredicted RBP12.85□□□□□ -0.35
HERC2-202ENST00000562136 ACP1P24666 158 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 KRT9P35527 623 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 USP8P40818 1118 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 CLCN6P51797 869 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 BPIFB4P59827 614 aa12.85□□□□□ -0.35
HERC2-202ENST00000562136 UBE2HP62256 183 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms