RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 RASSF4Q9H2L5 321 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CRISPLD1Q9H336 500 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 RETREG1Q9H6L5 497 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 UGT1A7Q9HAW7 530 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 UGT1A10Q9HAW8 530 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 UGT1A8Q9HAW9 530 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 NSMCE4AQ9NXX6 385 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 ZFATQ9P243 1243 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 TXNDC16Q9P2K2 825 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 HCSTQ9UBK5 93 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC27A5Q9Y2P5 690 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 PLLPQ9Y342 182 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 GREB1Q4ZG55 1949 aa12.9□□□□□ -0.35
AC055717.2-201ENST00000561864 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC12A8A0AV02 714 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 HMX2A2RU54 273 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 CARNS1A5YM72 827 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 DRGXA6NNA5 263 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 USP12O75317 370 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TROVE2P10155 538 aaKnown RBP eCLIP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TUFMP49411 452 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 LIG3P49916 1009 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 PAPOLAP51003 745 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TLE2Q04725 743 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TNK2Q07912 1038 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 DUSP4Q13115 394 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 IKBKEQ14164 716 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 PSMD5Q16401 504 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TRIM60Q495X7 471 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 ARHGAP36Q6ZRI8 547 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TMEM173Q86WV6 379 aaPredicted RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 C10orf67Q8IYJ2 551 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 GPR152Q8TDT2 470 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 FAM111AQ96PZ2 611 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 NOL6Q9H6R4 1146 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 MRM3Q9HC36 420 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 PIH1D1Q9NWS0 290 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 IPO11Q9UI26 975 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 TBX21Q9UL17 535 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC12A4Q9UP95 1085 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 CDY1Q9Y6F8 540 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 USH1CQ9Y6N9 552 aa12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
AC055717.2-201ENST00000561864 ZCWPW2A0A1B0GU75 182 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 NT5C1B-RDH14C9J2C7 533 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 BIRC5O15392 142 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 GLRA3O75311 464 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 SOAT2O75908 522 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 DNAJC8O75937 253 aaPredicted RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 NEBLO76041 1014 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 HLA-DQB2P05538 268 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 ATF6P18850 670 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 ALDH3A1P30838 453 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 SPRP35270 261 aaPredicted RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 SCTRP47872 440 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 ATN1P54259 1190 aaPredicted RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 CSE1LP55060 971 aaKnown RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 MPP3Q13368 585 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 PARP15Q460N3 678 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 MROH9Q5TGP6 573 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 SNX30Q5VWJ9 437 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 PRSS55Q6UWB4 352 aaPredicted RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 OTOAQ7RTW8 1153 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 TAS1R1Q7RTX1 841 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 NDUFAF2Q8N183 169 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 CCDC63Q8NA47 563 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 ISL2Q96A47 359 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 IGSF21Q96ID5 467 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 RBBP8Q99708 897 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 HERC2P3Q9BVR0 1158 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 KIFC1Q9BW19 673 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 CWH43Q9H720 699 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 RXFP1Q9HBX9 757 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 ABCF3Q9NUQ8 709 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 PCMTD2Q9NV79 361 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 MPP6Q9NZW5 540 aa12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
AC055717.2-201ENST00000561864 TLR5O60602 858 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 DCTN3O75935 186 aa12.87□□□□□ -0.35
AC055717.2-201ENST00000561864 TGDSO95455 350 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms