RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 HNRNPDQ14103 355 aaKnown RBP10.56□□□□□ -0.72
CLK3-205ENST00000561673 NUMA1Q14980 2115 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 NCAPHQ15003 741 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 SYCP1Q15431 976 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 STX1AQ16623 288 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 RAB6CQ53S08 254 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 ACBD5Q5T8D3 534 aaPredicted RBP10.56□□□□□ -0.72
CLK3-205ENST00000561673 LRRC31Q6UY01 552 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.56□□□□□ -0.72
CLK3-205ENST00000561673 DBX2Q6ZNG2 339 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 TFAP2DQ7Z6R9 452 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 FAM131BQ86XD5 332 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 SH2D3CQ8N5H7 860 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 EMC1Q8N766 993 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 OR2T34Q8NGX1 318 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 OR14C36Q8NHC7 312 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 SETD7Q8WTS6 366 aaKnown RBP10.56□□□□□ -0.72
CLK3-205ENST00000561673 HAPLN3Q96S86 360 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 PCDHB18PQ96TA0 734 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 PSMB7Q99436 277 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 RAB6CQ9H0N0 254 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 HSD3B7Q9H2F3 369 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 METTL5Q9NRN9 209 aaKnown RBP10.56□□□□□ -0.72
CLK3-205ENST00000561673 TM7SF3Q9NS93 570 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 SLC25A13Q9UJS0 675 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 PCOLCE2Q9UKZ9 415 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 PPM1HQ9ULR3 514 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 DAAM1Q9Y4D1 1078 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 PCDHB9Q9Y5E1 797 aa10.56□□□□□ -0.72
CLK3-205ENST00000561673 C1QTNF9BB2RNN3 333 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 K7ERQ8 282 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 WNT9AO14904 365 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 MCF2LO15068 1137 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 SNAP91O60641 907 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 KRT37O76014 449 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 GJB6O95452 261 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 RHOCP08134 193 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 C1QTNF9P0C862 333 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 UNGP13051 313 aaPredicted RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 OR1E1P30953 314 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 CCR5P51681 352 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 RACK1P63244 317 aaKnown RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 KRT83P78385 493 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 C15orf59Q2T9L4 293 aaPredicted RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 POM121L1PQ3SYA9 428 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 CCDC14Q49A88 953 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 Q6ZVU0 165 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 APTXQ7Z2E3 356 aaKnown RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 ADAT2Q7Z6V5 191 aaKnown RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 DSG4Q86SJ6 1040 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 SETD3Q86TU7 594 aaPredicted RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 CHCHD4Q8N4Q1 142 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 NEK11Q8NG66 645 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 RXFP2Q8WXD0 754 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 OR8D1Q8WZ84 308 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 PCMTD1Q96MG8 357 aaPredicted RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 SLC6A18Q96N87 628 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
CLK3-205ENST00000561673 VPS51Q9UID3 782 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 HS3ST2Q9Y278 367 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 PCDHGB2Q9Y5G2 931 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 CACNA1EQ15878 2313 aa10.55□□□□□ -0.72
CLK3-205ENST00000561673 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3DA0A087WVF3 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3IA0A087WXS9 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3EA0A087X179 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3KA0A087X1G2 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3FA6NER0 549 aaPredicted RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 C2CD4BA6NLJ0 364 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3LB9A6J9 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 VILLO15195 856 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 SMAD6O43541 496 aaKnown RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 BNIP3LO60238 219 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 RTN2O75298 545 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TRIM16O95361 564 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 MBD3O95983 291 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 WNT1P04628 370 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 PROS1P07225 676 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 CTSLP07711 333 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3HP0C7X1 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 SRCP12931 536 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 ATP1A3P13637 1013 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 GLDCP23378 1020 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 RRM1P23921 792 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 ADRA1BP35368 520 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 CTSKP43235 329 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TYRO3Q06418 890 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 CNTN1Q12860 1018 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 PTP4A2Q12974 167 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 SUZ12Q15022 739 aaKnown RBP10.54□□□□□ -0.72
CLK3-205ENST00000561673 CDO1Q16878 200 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 CLEC16AQ2KHT3 1053 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 ZNF423Q2M1K9 1284 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3GQ6DHY5 549 aa10.54□□□□□ -0.72
CLK3-205ENST00000561673 TBC1D3CQ6IPX1 549 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms