RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PCED1BQ96HM7 432 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 PIWIL1Q96J94 861 aaKnown RBP5.55□□□□□ -1.52
HERC1-213ENST00000561359 DMRTB1Q96MA1 342 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 TCF12Q99081 682 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 OMDQ99983 421 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 TIPINQ9BVW5 301 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 AGXT2Q9BYV1 514 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 SYNDIG1Q9H7V2 258 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 PRSS16Q9NQE7 514 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 UCKL1Q9NWZ5 548 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 GDAP2Q9NXN4 497 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 TUBD1Q9UJT1 453 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 VPS4AQ9UN37 437 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 HIF3AQ9Y2N7 669 aa5.55□□□□□ -1.52
HERC1-213ENST00000561359 R3HCC1Q9Y3T6 440 aaKnown RBP5.55□□□□□ -1.52
HERC1-213ENST00000561359 ZFC3H1O60293 1989 aaKnown RBP5.55□□□□□ -1.52
HERC1-213ENST00000561359 PRRC2CQ9Y520 2896 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 NIPBLQ6KC79 2804 aaeCLIP5.54□□□□□ -1.52
HERC1-213ENST00000561359 SVILO95425 2214 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 RNASEH1O60930 286 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 DTNBO60941 627 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 SEMA7AO75326 666 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 RNASEH2AO75792 299 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 CDKL5O76039 1030 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 PENKP01210 267 aaPredicted RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 CYBBP04839 570 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 RNF224P0DH78 156 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 WT1P19544 449 aaPredicted RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 GNLYP22749 145 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 EVCP57679 992 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 OVGP1Q12889 678 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 ZNF177Q13360 481 aaPredicted RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 STAT4Q14765 748 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 POU4F3Q15319 338 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 CDKN3Q16667 212 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 EXOSC6Q5RKV6 272 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 SNX30Q5VWJ9 437 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 C1QL3Q5VWW1 255 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 TMEM215Q68D42 235 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 ADALQ6DHV7 355 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 NAPEPLDQ6IQ20 393 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 CRTC1Q6UUV9 634 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 EFL1Q7Z2Z2 1120 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 DSG4Q86SJ6 1040 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 HEATR4Q86WZ0 1026 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 FBXO39Q8N4B4 442 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 LRRC52Q8N7C0 313 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 OR14C36Q8NHC7 312 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 CACTINQ8WUQ7 758 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 CCDC74AQ96AQ1 378 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 P2RY11Q96G91 374 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 TMPRSS13Q9BYE2 586 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 ZNF518BQ9C0D4 1074 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 ELOVL4Q9GZR5 314 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 NEUROG2Q9H2A3 272 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 TMEM245Q9H330 911 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 PABPC3Q9H361 631 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 USP29Q9HBJ7 922 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 TMEM30AQ9NV96 361 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 NLGN3Q9NZ94 848 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 LARSQ9P2J5 1176 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 DKK3Q9UBP4 350 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 SEL1LQ9UBV2 794 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 SERGEFQ9UGK8 458 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 AGO2Q9UKV8 859 aaKnown RBP5.54□□□□□ -1.52
HERC1-213ENST00000561359 SCML1Q9UN30 329 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 PCDHGA7Q9Y5G6 932 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 KIF26BQ2KJY2 2108 aa5.54□□□□□ -1.52
HERC1-213ENST00000561359 APCP25054 2843 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 ESPL1Q14674 2120 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3DA0A087WVF3 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3IA0A087WXS9 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3EA0A087X179 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3KA0A087X1G2 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 LY6G6EA0A0G2JKS1 128 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3FA6NER0 549 aaPredicted RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 NEMP2A6NFY4 417 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 WIPF3A6NGB9 483 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3LB9A6J9 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 K7ENM7 598 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 K7ESM1 405 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 CLDN5O00501 218 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 MID1O15344 667 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TCEA3O75764 348 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 IL18RAPO95256 599 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 DDAH2O95865 285 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 PIGRP01833 764 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 TBC1D3HP0C7X1 549 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 JMJD7P0C870 316 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 DRD2P14416 443 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 GUCY2CP25092 1073 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 MAP4P27816 1152 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 MAPK1P28482 360 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 MAT2AP31153 395 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 UGT1A5P35504 534 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 CHKAP35790 457 aa5.53□□□□□ -1.52
HERC1-213ENST00000561359 ATP5C1P36542 298 aaKnown RBP5.53□□□□□ -1.52
HERC1-213ENST00000561359 HARS2P49590 506 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms