RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CMKLR1Q99788 373 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 DDX50Q9BQ39 737 aaKnown RBP9.85□□□□□ -0.83
HERC1-210ENST00000560897 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
HERC1-210ENST00000560897 UPF2Q9HAU5 1272 aaKnown RBP9.85□□□□□ -0.83
HERC1-210ENST00000560897 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 AKAP7Q9P0M2 348 aaPredicted RBP9.85□□□□□ -0.83
HERC1-210ENST00000560897 SPASTQ9UBP0 616 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 STOML2Q9UJZ1 356 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 USP3Q9Y6I4 520 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 LRBAP50851 2863 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 ZFHX3Q15911 3703 aa9.85□□□□□ -0.83
HERC1-210ENST00000560897 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 NTN3O00634 580 aaPredicted RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 RPLP0P05388 317 aaKnown RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 ANXA6P08133 673 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 ITIH1P19827 911 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CCKBRP32239 447 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CTSOP43234 321 aaPredicted RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 SLC8A3P57103 927 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CLDN2P57739 230 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 ANAPC15P60006 121 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CYP24A1Q07973 514 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 PIK3R6Q5UE93 754 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CAPRIN2Q6IMN6 1127 aaKnown RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 RFWD3Q6PCD5 774 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 GCNT7Q6ZNI0 430 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 ABI3BPQ7Z7G0 1075 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 ZC3H18Q86VM9 953 aaKnown RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 HORMAD1Q86X24 394 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 DTX1Q86Y01 620 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 SLC35F3Q8IY50 421 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 GALNT11Q8NCW6 608 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 PTPRN2Q92932 1015 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 FAM131CQ96AQ9 280 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 ABHD17AQ96GS6 310 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 RPL10LQ96L21 214 aaKnown RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 NOX5Q96PH1 765 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 BOCQ9BWV1 1114 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 DUSP16Q9BY84 665 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CPEB1Q9BZB8 566 aaKnown RBP9.84□□□□□ -0.83
HERC1-210ENST00000560897 SDCBP2Q9H190 292 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CAAP1Q9H8G2 361 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 DYRK4Q9NR20 520 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 DKK3Q9UBP4 350 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 CCDC39Q9UFE4 941 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 HMGXB4Q9UGU5 601 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 SLCO3A1Q9UIG8 710 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 PADI4Q9UM07 663 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 DOLKQ9UPQ8 538 aa9.84□□□□□ -0.83
HERC1-210ENST00000560897 UNC13CQ8NB66 2214 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 EFCAB7A8K855 629 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 PCDH8O95206 1070 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 LONP1P36776 959 aaKnown RBP9.83□□□□□ -0.84
HERC1-210ENST00000560897 RABIFP47224 123 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 CYP2J2P51589 502 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 METAP1P53582 386 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 AP3M2P53677 418 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 NCOA4Q13772 614 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 FZD2Q14332 565 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 KYAT3Q6YP21 454 aaKnown RBP9.83□□□□□ -0.84
HERC1-210ENST00000560897 SV2BQ7L1I2 683 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 UNC45BQ8IWX7 931 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 SDR16C5Q8N3Y7 309 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.83□□□□□ -0.84
HERC1-210ENST00000560897 RNF34Q969K3 372 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 NT5C1AQ9BXI3 368 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 PANK4Q9NVE7 773 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 GULP1Q9UBP9 304 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 APOBEC3BQ9UH17 382 aaKnown RBP9.83□□□□□ -0.84
HERC1-210ENST00000560897 SFMBT1Q9UHJ3 866 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 GGT7Q9UJ14 662 aa9.83□□□□□ -0.84
HERC1-210ENST00000560897 INTS6Q9UL03 887 aaKnown RBP9.83□□□□□ -0.84
HERC1-210ENST00000560897 TRPM6Q9BX84 2022 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 SPTY2D1-AS1A0A0U1RR47 76 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 TTLL8A6PVC2 850 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 CASC3O15234 703 aaKnown RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 CAPN5O15484 640 aaPredicted RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 SEMA7AO75326 666 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 PRKCGP05129 697 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 GRNP28799 593 aaKnown RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 NEK4P51957 841 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 ADKP55263 362 aaKnown RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 SULT2A1Q06520 285 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 PDE1CQ14123 709 aaPredicted RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 ZNF284Q2VY69 593 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 ACCSLQ4AC99 568 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 XXYLT1Q8NBI6 393 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 APOBEC4Q8WW27 367 aaKnown RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 SCG3Q8WXD2 468 aaKnown RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 CCDC74AQ96AQ1 378 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 CASS4Q9NQ75 786 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 PRDM8Q9NQV8 689 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 HS3ST3A1Q9Y663 406 aa9.82□□□□□ -0.84
HERC1-210ENST00000560897 SPENQ96T58 3664 aaKnown RBP9.82□□□□□ -0.84
HERC1-210ENST00000560897 GOLGA6L7A0A1B0GV03 622 aa9.81□□□□□ -0.84
HERC1-210ENST00000560897 C9orf172C9J069 976 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms