RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 PRLRP16471 622 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 ACVRL1P37023 503 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 RPS9P46781 194 aaKnown RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 FZD5Q13467 585 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 PDK1Q15118 436 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 CCDC181Q5TID7 509 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 DCAF12L1Q5VU92 463 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 ZSCAN30Q86W11 494 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 SFTPA1Q8IWL2 248 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 NPWQ8N729 165 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 ZNF513Q8N8E2 541 aaPredicted RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 USP33Q8TEY7 942 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 EZH1Q92800 747 aaPredicted RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 PBXIP1Q96AQ6 731 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 CELF6Q96J87 481 aaKnown RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 WDR24Q96S15 920 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 PSMB7Q99436 277 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 NAPGQ99747 312 aaPredicted RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 IER2Q9BTL4 223 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 FOXQ1Q9C009 403 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 THAP10Q9P2Z0 257 aaPredicted RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
USP8-209ENST00000560297 VPS51Q9UID3 782 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 SLC8A2Q9UPR5 921 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 ERVW-1Q9UQF0 538 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 HEY1Q9Y5J3 304 aa12.54□□□□□ -0.4
USP8-209ENST00000560297 TTC28Q96AY4 2481 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 TICRRQ7Z2Z1 1910 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 CHURC1-FNTBB4DL54 471 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 APOC4-APOC2K7ER74 178 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 CES2O00748 559 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 RNF40O75150 1001 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 APOC2P02655 101 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 ATP1A1P05023 1023 aaKnown RBP12.53□□□□□ -0.4
USP8-209ENST00000560297 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
USP8-209ENST00000560297 TIE1P35590 1138 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
USP8-209ENST00000560297 CLCN6P51797 869 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 SEC13P55735 322 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 DYNLT1P63172 113 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 IL10RBQ08334 325 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 GALNT2Q10471 571 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
USP8-209ENST00000560297 LLGL1Q15334 1064 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 TMCO4Q5TGY1 634 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 PAPD7Q5XG87 772 aaKnown RBP12.53□□□□□ -0.4
USP8-209ENST00000560297 CCDC105Q8IYK2 499 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 MAIP1Q8WWC4 291 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 TSGA13Q96PP4 275 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 EPHX3Q9H6B9 360 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 RBM12Q9NTZ6 932 aaKnown RBP12.53□□□□□ -0.4
USP8-209ENST00000560297 DTLQ9NZJ0 730 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 SNX12Q9UMY4 172 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 MFHAS1Q9Y4C4 1052 aa12.53□□□□□ -0.4
USP8-209ENST00000560297 COL4A2P08572 1712 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 ATP9BO43861 1147 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 MFSD11O43934 449 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CEP104O60308 925 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 SNAP91O60641 907 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 MAFKO60675 156 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 AOC1P19801 751 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CCNCP24863 283 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 NTSR1P30989 418 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CASQ1P31415 396 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CXCR5P32302 372 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CTSOP43234 321 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 GBE1Q04446 702 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 ADCY2Q08462 1091 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 XRCC4Q13426 336 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 ENPP2Q13822 863 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 ZNF234Q14588 700 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 RFTN1Q14699 578 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 PTPRNQ16849 979 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 FNDC3BQ53EP0 1204 aaKnown RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 INO80DQ53TQ3 878 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 C2orf27AQ580R0 203 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 EOGTQ5NDL2 527 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 EGFLAMQ63HQ2 1017 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 AADACL2Q6P093 401 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 SLC13A5Q86YT5 568 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 CHPFQ8IZ52 775 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 IL17RCQ8NAC3 791 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms