RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 SLC31A1O15431 190 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 SLC28A2O43868 658 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 IGLV3-25P01717 112 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 PRLRP16471 622 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 ZC3H12AQ5D1E8 599 aaKnown RBP20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 KIAA1614Q5VZ46 1190 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 NEK5Q6P3R8 708 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 TMEM270Q6UE05 265 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 SLC22A18ASQ8N1D0 253 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 BTN2A3PQ96KV6 586 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 NOX5Q96PH1 765 aa20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.33■□□□□ 0.85
RABGGTA-214ENST00000560163 PTPN13Q12923 2485 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 K7ESM1 405 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 M0QYV0 167 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 CETN3O15182 167 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 ALPPL2P10696 532 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 EPB41P11171 864 aaKnown RBP20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 KRT10P13645 584 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 TGM2P21980 687 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 TBXAS1P24557 533 aaPredicted RBP20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 DUSP3P51452 185 aaPredicted RBP20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 DNM1Q05193 864 aaKnown RBP20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 DLG2Q15700 870 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 ABI3BPQ7Z7G0 1075 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 CHSY1Q86X52 802 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 OR52K2Q8NGK3 314 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 KLK6Q92876 244 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 ERCC4Q92889 916 aaPredicted RBP20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 CCDC47Q96A33 483 aaKnown RBP20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 GRAMD1AQ96CP6 724 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 MYOCQ99972 504 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 ABCG4Q9H172 646 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 GPR27Q9NS67 375 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 BSNQ9UPA5 3926 aa20.32■□□□□ 0.84
RABGGTA-214ENST00000560163 FAM237AA0A1B0GTK4 181 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 A0A1W2PQU0 124 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 NEMP2A6NFY4 417 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 CDRT15L2A8MXV6 281 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 C1QTNF3-AMACRE9PGA6 284 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 CALCAP01258 141 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 CTSLP07711 333 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 BRD2P25440 801 aaKnown RBP20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 CSRP3P50461 194 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 LRMPQ12912 555 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 STILQ15468 1287 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 C3orf38Q5JPI3 329 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 GCNT7Q6ZNI0 430 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 Q6ZVU0 165 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 CIR1Q86X95 450 aaPredicted RBP20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 IFI44Q8TCB0 444 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 MAPK15Q8TD08 544 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 FEM1AQ9BSK4 669 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 DUSP23Q9BVJ7 150 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 FZD3Q9NPG1 666 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 ZFR2Q9UPR6 939 aaKnown RBP20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 PCDHGA8Q9Y5G5 932 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 ENTPD2Q9Y5L3 495 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 OR51B4Q9Y5P0 310 aa20.31■□□□□ 0.84
RABGGTA-214ENST00000560163 TCAF2A6NFQ2 919 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 KCNU1A8MYU2 1149 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 F5H5T6 163 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 NEBLO76041 1014 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 APOEP02649 317 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 GPD2P43304 727 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 NUCB2P80303 420 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 ACCSLQ4AC99 568 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 DCAF17Q5H9S7 520 aaPredicted RBP20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 TCERG1LQ5VWI1 586 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 HORMAD1Q86X24 394 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 SLC35C1Q96A29 364 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 CCDC97Q96F63 343 aaPredicted RBP20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 ATXN7L3BQ96GX2 97 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 CALN1Q9BXU9 219 aa20.3■□□□□ 0.84
RABGGTA-214ENST00000560163 RNF103O00237 685 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 TRUB2O95900 331 aaKnown RBP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 HNRNPA2B1P22626 353 aaKnown RBP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 RBMS1P29558 406 aaKnown RBP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 AKT2P31751 481 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 NDUFA8P51970 172 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 OXCT1P55809 520 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 CLDN2P57739 230 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 PITX1P78337 314 aaPredicted RBP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 SRSF1Q07955 248 aaKnown RBP eCLIP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 ARL13BQ3SXY8 428 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 ZNF542PQ5EBM4 170 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 TTC39BQ5VTQ0 682 aaPredicted RBP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 SH2D3CQ8N5H7 860 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 EXD3Q8N9H8 876 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 FAM149B1Q96BN6 582 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 BMFQ96LC9 184 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 SLC25A13Q9UJS0 675 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 PCDHB4Q9Y5E5 795 aa20.29■□□□□ 0.84
RABGGTA-214ENST00000560163 PMS2P1A4D2B8 440 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 SLC16A3O15427 465 aaKnown RBP20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 EFSO43281 561 aa20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 SART1O43290 800 aaKnown RBP20.28■□□□□ 0.84
RABGGTA-214ENST00000560163 ZNF18P17022 549 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms