RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CYP2A6P11509 494 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 RARGP13631 454 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCNCP24863 283 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CPT1AP50416 773 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 LLGL2Q6P1M3 1020 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 WDR59Q6PJI9 974 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 RAB43Q86YS6 212 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 TNFAIP8L1Q8WVP5 186 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 PANX3Q96QZ0 392 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 GORASP1Q9BQQ3 440 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CASKO14936 926 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 MYBL2P10244 700 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 TYMPP19971 482 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 GP5P40197 560 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 RFX4Q33E94 735 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAXCQ5TGI0 409 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CYP2R1Q6VVX0 501 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 UBE2E3Q969T4 207 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 ARMCX1Q9P291 453 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 OR10H2O60403 315 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 TSPAN1O60635 241 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF7P17097 686 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 RHOAP61586 193 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 EIF5AP63241 154 aaKnown RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 PRMT7Q9NVM4 692 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 FBXO10Q9UK96 956 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 ERBB3P21860 1342 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCNKO75909 580 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 FSHRP23945 695 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ECHS1P30084 290 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 RAP1GAPP47736 663 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZC3H7AQ8IWR0 971 aaKnown RBP14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 RASGEF1AQ8N9B8 481 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 TIMMDC1Q9NPL8 285 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 GMIPQ9P107 970 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 USP18Q9UMW8 372 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 COMMD3-BMI1R4GMX3 469 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZBTB14O43829 449 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 TAS2R41P59536 307 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 SLC25A23Q9BV35 468 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 RIOK2Q9BVS4 552 aaKnown RBP14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF350Q9GZX5 532 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 C2CD2LO14523 706 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 CDK7P50613 346 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ACOX1Q15067 660 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 BMT2Q1RMZ1 405 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 HSDL1Q3SXM5 330 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 EPC2Q52LR7 807 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 IL27RAQ6UWB1 636 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 DEF8Q6ZN54 512 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 SAMD4AQ9UPU9 718 aaKnown RBP14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 EPORP19235 508 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 MGAT5Q09328 741 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 NELL1Q92832 810 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 CNPPD1Q9BV87 410 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 PRRG4Q9BZD6 226 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 PLB1Q6P1J6 1458 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 SPIBQ01892 262 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 NAB1Q13506 487 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 EMC2Q15006 297 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 NECTIN1Q15223 517 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 RHEBQ15382 184 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 GPSM1Q86YR5 675 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 UNC5CLQ8IV45 518 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 DSELQ8IZU8 1212 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 METTL6Q8TCB7 284 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 STK32AQ8WU08 396 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 CDRT15Q96T59 188 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAIM2Q9BWQ8 316 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 POMKQ9H5K3 350 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAM240BA0A1B0GVZ2 78 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 LARGE1O95461 756 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 GSTT2BP0CG30 244 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 ITGB6P18564 788 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 TMPRSS11AQ6ZMR5 421 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 TBATAQ96M53 351 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 AGPAT5Q9NUQ2 364 aa14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 CUEDC1Q9NWM3 386 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P12-202ENST00000559989 SLC33A1O00400 549 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 NR1H2P55055 460 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 CBX3Q13185 183 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 MED22Q15528 200 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 TBC1D25Q3MII6 688 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 CBWD6Q4V339 395 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 GRHL2Q6ISB3 625 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PLET1Q6UQ28 207 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PTCHD4Q6ZW05 846 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAM98AQ8NCA5 519 aaKnown RBP14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 REEP2Q9BRK0 252 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 PTCH1Q13635 1447 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 GIMD1P0DJR0 217 aa14.03□□□□□ -0.16
CSPG4P12-202ENST00000559989 MECP2P51608 486 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms