RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 KCNK12Q9HB15 430 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ABCB8Q9NUT2 735 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 PCYOX1Q9UHG3 505 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 IPO11Q9UI26 975 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 GGA2Q9UJY4 613 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 HPCAL4Q9UM19 191 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 DRG1Q9Y295 367 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 SZT2Q5T011 3432 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 EFCAB8A8MWE9 144 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 J3KR12 359 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 KCNK1O00180 336 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 CBX4O00257 560 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 KDELR3O43731 214 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 CACNG3O60359 315 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 SNAP91O60641 907 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 MAFKO60675 156 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 NEBLO76041 1014 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 STK10O94804 968 aaKnown RBP10.66□□□□□ -0.7
TPM1-221ENST00000559831 GAS8O95995 478 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 KRT14P02533 472 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 GLDCP23378 1020 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 CCNCP24863 283 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 HLA-FP30511 346 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 PTGIRP43119 386 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 SLC6A11P48066 632 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 DGKGP49619 791 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 VPS41P49754 854 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 CLCN6P51797 869 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 TERF1P54274 439 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 NRLP54845 237 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 SLC7A5Q01650 507 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 ITPRIPL2Q3MIP1 535 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 PITRM1Q5JRX3 1037 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 RNF43Q68DV7 783 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 ASTLQ6HA08 431 aaPredicted RBP10.66□□□□□ -0.7
TPM1-221ENST00000559831 GRAMD4Q6IC98 578 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 TIGD7Q6NT04 549 aaPredicted RBP10.66□□□□□ -0.7
TPM1-221ENST00000559831 MAATS1Q7Z4T9 603 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 JAMLQ86YT9 394 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 LRRC49Q8IUZ0 686 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 APCDD1Q8J025 514 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 NSMCE1Q8WV22 266 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 TSGA13Q96PP4 275 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 FEM1AQ9BSK4 669 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 LRRC1Q9BTT6 524 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 SLC2A11Q9BYW1 496 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 IGSF9Q9P2J2 1179 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 THEGQ9P2T0 379 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 FEZ2Q9UHY8 353 aaPredicted RBP10.66□□□□□ -0.7
TPM1-221ENST00000559831 COL4A2P08572 1712 aa10.66□□□□□ -0.7
TPM1-221ENST00000559831 ANKRD36A6QL64 1941 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 FAM187AA6NFU0 413 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 RNF103O00237 685 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 TRIM24O15164 1050 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 PRAMEF11O60813 436 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 TULP3O75386 442 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 JCHAINP01591 159 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 ZSCAN5DPP0CG00 497 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 PABPC1P11940 636 aaKnown RBP10.65□□□□□ -0.7
TPM1-221ENST00000559831 PTPN3P26045 913 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 STIP1P31948 543 aaKnown RBP10.65□□□□□ -0.7
TPM1-221ENST00000559831 GJA4P35212 333 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 ACTN2P35609 894 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 SOX9P48436 509 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 IL10RBQ08334 325 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 ZBTB17Q13105 803 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 SLC12A1Q13621 1099 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 GAB4Q2WGN9 574 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 PLEKHG6Q3KR16 790 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 FUT11Q495W5 492 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 LINGO4Q6UY18 593 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 SLC44A3Q8N4M1 653 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 TAB3Q8N5C8 712 aaPredicted RBP10.65□□□□□ -0.7
TPM1-221ENST00000559831 DCAF4L2Q8NA75 395 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 GLIS1Q8NBF1 620 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 CCDC110Q8TBZ0 833 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 UBXN4Q92575 508 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 ALG14Q96F25 216 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 LMLNQ96KR4 655 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 ACE2Q9BYF1 805 aaPredicted RBP10.65□□□□□ -0.7
TPM1-221ENST00000559831 TRIM31Q9BZY9 425 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 USP29Q9HBJ7 922 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 KLHL8Q9P2G9 620 aaPredicted RBP10.65□□□□□ -0.7
TPM1-221ENST00000559831 UBA2Q9UBT2 640 aaPredicted RBP10.65□□□□□ -0.7
TPM1-221ENST00000559831 ASIC3Q9UHC3 531 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 VPS51Q9UID3 782 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 TTLL3Q9Y4R7 772 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 OR51B4Q9Y5P0 310 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 ACTL7AQ9Y615 435 aa10.65□□□□□ -0.7
TPM1-221ENST00000559831 LOC730098B7Z3J9 87 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 F5H423 210 aaPredicted RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ARNTLO00327 626 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 MATN3O15232 486 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 MTSS1O43312 755 aa10.64□□□□□ -0.71
TPM1-221ENST00000559831 NARSO43776 548 aaKnown RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 ZNF189O75820 626 aaPredicted RBP10.64□□□□□ -0.71
TPM1-221ENST00000559831 HEXIM1O94992 359 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms