RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 STON1Q9Y6Q2 735 aa11.16□□□□□ -0.62
TPM1-217ENST00000559108 hCG_1818297A0A087WSY0 165 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 TCRBV7S2A1N4TA0A589 114 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 J3KR12 359 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 KRT86O43790 486 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 RAMP2O60895 175 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 GJB3O75712 270 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 PEX11BO96011 259 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 DLDP09622 509 aaKnown RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 SRCP12931 536 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 DESP17661 470 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 HTR7P34969 479 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 DNA2P51530 1060 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 MRPS21P82921 87 aaKnown RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 EIF4HQ15056 248 aaKnown RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 PAFAH1B3Q15102 231 aaKnown RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 PDK2Q15119 407 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 SLC9A4Q6AI14 798 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 B4GALNT4Q76KP1 1039 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 PEX26Q7Z412 305 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 SYNPOQ8N3V7 929 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 NSMCE3Q96MG7 304 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 HHIPQ96QV1 700 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 SPON2Q9BUD6 331 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 TLR10Q9BXR5 811 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 TSGA10Q9BZW7 698 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 CATSPERBQ9H7T0 1116 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 ATP13A1Q9HD20 1204 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 RCOR3Q9P2K3 495 aaPredicted RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 SAE1Q9UBE0 346 aaPredicted RBP11.15□□□□□ -0.62
TPM1-217ENST00000559108 MMP17Q9ULZ9 603 aa11.15□□□□□ -0.62
TPM1-217ENST00000559108 CBX4O00257 560 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 POLR2EP19388 210 aaKnown RBP11.14□□□□□ -0.63
TPM1-217ENST00000559108 ARL4AP40617 200 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 RGRP47804 291 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 PXNP49023 591 aaPredicted RBP11.14□□□□□ -0.63
TPM1-217ENST00000559108 PAPOLAP51003 745 aaKnown RBP11.14□□□□□ -0.63
TPM1-217ENST00000559108 METAP1P53582 386 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 COPAP53621 1224 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 DYNLT1P63172 113 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 ECT2LQ008S8 904 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 SERINC3Q13530 473 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 SLC12A1Q13621 1099 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 DMC1Q14565 340 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 POLD3Q15054 466 aaPredicted RBP11.14□□□□□ -0.63
TPM1-217ENST00000559108 CRY1Q16526 586 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 FBXO43Q4G163 708 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 MEI1Q5TIA1 1274 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 ZNF783Q6ZMS7 281 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 SYT13Q7L8C5 426 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 CHPFQ8IZ52 775 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 SPEM1Q8N4L4 309 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 SH2D3CQ8N5H7 860 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 C1QTNF1Q9BXJ1 281 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 MAGEH1Q9H213 219 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 SPATA6Q9NWH7 488 aaPredicted RBP11.14□□□□□ -0.63
TPM1-217ENST00000559108 DTLQ9NZJ0 730 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 RAPGEFL1Q9UHV5 662 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 AMFRQ9UKV5 643 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 HS3ST2Q9Y278 367 aa11.14□□□□□ -0.63
TPM1-217ENST00000559108 TNRC6BQ9UPQ9 1833 aaKnown RBP11.14□□□□□ -0.63
TPM1-217ENST00000559108 WDFY4Q6ZS81 3184 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 ZNF487B1APH4 448 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 DFFAO00273 331 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 MUSKO15146 869 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 DAPK3O43293 454 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 KDELR3O43731 214 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 SIN3BO75182 1162 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 HOXB2P14652 356 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 GABRG2P18507 467 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 NTSR1P30989 418 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 NDST2P52849 883 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 IHHQ14623 411 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 NUMA1Q14980 2115 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 FNDC3BQ53EP0 1204 aaKnown RBP11.13□□□□□ -0.63
TPM1-217ENST00000559108 IL31Q6EBC2 164 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 Q6ZVU0 165 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 CACUL1Q86Y37 369 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 SLC35F6Q8N357 371 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 EXD1Q8NHP7 514 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 PTPRN2Q92932 1015 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 FAM118BQ9BPY3 351 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 HEMGNQ9BXL5 484 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 MKRN2Q9H000 416 aaKnown RBP11.13□□□□□ -0.63
TPM1-217ENST00000559108 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 RETREG1Q9H6L5 497 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 PRSS16Q9NQE7 514 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
TPM1-217ENST00000559108 LHX3Q9UBR4 397 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
TPM1-217ENST00000559108 CEP192Q8TEP8 1941 aa11.13□□□□□ -0.63
TPM1-217ENST00000559108 USP34Q70CQ2 3546 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 ENC1O14682 589 aa11.12□□□□□ -0.63
TPM1-217ENST00000559108 NCAM2O15394 837 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms