RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KCNB1Q14721 858 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ICAM4Q14773 271 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 VEPH1Q14D04 833 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PPP2R5BQ15173 497 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SLC18A3Q16572 532 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TXNRD1Q16881 649 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 DPCR1Q3MIW9 517 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ZSCAN23Q3MJ62 389 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 FAM153CQ494X1 144 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 DUSP28Q4G0W2 176 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 BMP2KLQ5H9B9 411 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ZKSCAN2Q63HK3 967 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 NAPEPLDQ6IQ20 393 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TTI2Q6NXR4 508 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CDC73Q6P1J9 531 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 MTFR2Q6P444 385 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 KLHL35Q6PF15 583 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 NCEH1Q6PIU2 408 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SLC30A9Q6PML9 568 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 DHRS13Q6UX07 377 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 NAPRTQ6XQN6 538 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SLC46A3Q7Z3Q1 461 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 WDR53Q7Z5U6 358 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PRRT2Q7Z6L0 340 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 KRT77Q7Z794 578 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TADA2BQ86TJ2 420 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 C1orf210Q8IVY1 113 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SFTPA1Q8IWL2 248 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PALM2Q8IXS6 379 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 C2CD4CQ8TF44 421 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ASB10Q8WXI3 467 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 EDAQ92838 391 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 RFKQ969G6 155 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 MYEOVQ96EZ4 313 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SPATA17Q96L03 361 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CCDC17Q96LX7 622 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ADAD1Q96M93 576 aaKnown RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PLEKHG4BQ96PX9 1271 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ASB2Q96Q27 587 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 FYTTD1Q96QD9 318 aaKnown RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SNX18Q96RF0 628 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 NR1H4Q96RI1 486 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 IFT27Q9BW83 186 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 APOL6Q9BWW8 343 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 HEMGNQ9BXL5 484 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CADM1Q9BY67 442 aaKnown RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TXLNGYQ9BZA5 131 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 NUF2Q9BZD4 464 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CIPCQ9C0C6 399 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ERVK-5Q9HDB9 667 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SNTG1Q9NSN8 517 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TAB2Q9NYJ8 693 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 MRPL15Q9P015 296 aaKnown RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 LRIT1Q9P2V4 623 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 UPB1Q9UBR1 384 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ZHX1Q9UKY1 873 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 MKLN1Q9UL63 735 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 GABRQQ9UN88 632 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 KDM3AQ9Y4C1 1321 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CENPVL1A0A0U1RR11 272 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 TCRBV7S3A2A0A539 114 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ARHGAP10A1A4S6 786 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 OR6C68A6NDL8 312 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 MCIDASD6RGH6 385 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 H0YIZ8 118 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CLIC1O00299 241 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 BCAT2O15382 392 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CNTN5O94779 1100 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 RPN1P04843 607 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 EIF2S1P05198 315 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 IRF1P10914 325 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 TYK2P29597 1187 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ACSL1P33121 698 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PTGS2P35354 604 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CPOXP36551 454 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PTPN9P43378 593 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 MTNR1AP48039 350 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CCT8P50990 548 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CYP2J2P51589 502 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 MRPL12P52815 198 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CDH8P55286 799 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PRAMEP78395 509 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 IFI35P80217 286 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 MRPS35P82673 323 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CFHR3Q02985 330 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 EPS8Q12929 822 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 HNRNPA0Q13151 305 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 KPNB1Q14974 876 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PTPRRQ15256 657 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 GSTA3Q16772 222 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PFKFB3Q16875 520 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ANXA2RQ3ZCQ2 193 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 NRN1LQ496H8 165 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 USP39Q53GS9 565 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ABHD17BQ5VST6 288 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 GKAP1Q5VSY0 366 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 NAA16Q6N069 864 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 VSTM1Q6UX27 236 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 IL20RBQ6UXL0 311 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 DCDC5Q6ZRR9 648 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms