RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 LRRC32Q14392 662 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 TFDP3Q5H9I0 405 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 BMP8AQ7Z5Y6 402 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 ARHGAP12Q8IWW6 846 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
GABPB1-208ENST00000558970 CHPFQ8IZ52 775 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■□□□ 12.2
GABPB1-208ENST00000558970 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
GABPB1-208ENST00000558970 FAF2Q96CS3 445 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 ALG14Q96F25 216 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
GABPB1-208ENST00000558970 OSBPL8Q9BZF1 889 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 SLC25A13Q9UJS0 675 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 RAD54BQ9Y620 910 aa12.72□□□□□ -0.37
GABPB1-208ENST00000558970 ZNF318Q5VUA4 2279 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ARHGAP42A6NI28 874 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 J3KR12 359 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 K7ERQ8 282 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 CEP104O60308 925 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ATP5BP06576 529 aaKnown RBP12.71□□□□□ -0.37
GABPB1-208ENST00000558970 PECAM1P16284 738 aaPredicted RBP12.71□□□□□ -0.37
GABPB1-208ENST00000558970 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ETFBP38117 255 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 CETN2P41208 172 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ECT2LQ008S8 904 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 SLC12A1Q13621 1099 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 TFDP2Q14188 446 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ZNF234Q14588 700 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ACCSLQ4AC99 568 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 HS1BP3Q53T59 392 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 SERPINA13PQ6UXR4 307 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 KIAA0907Q7Z7F0 614 aaPredicted RBP12.71□□□□□ -0.37
GABPB1-208ENST00000558970 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 UMODL1-AS1Q8N2C9 162 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 ATPAF2Q8N5M1 289 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 TXNDC5Q8NBS9 432 aaKnown RBP12.71□□□□□ -0.37
GABPB1-208ENST00000558970 UCMAQ8WVF2 138 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 C2orf49Q9BVC5 232 aaPredicted RBP12.71□□□□□ -0.37
GABPB1-208ENST00000558970 MAGEH1Q9H213 219 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 LRRC19Q9H756 370 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 SP110Q9HB58 689 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 HCN2Q9UL51 889 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 OR51B4Q9Y5P0 310 aa12.71□□□□□ -0.37
GABPB1-208ENST00000558970 TCRBV7S2A1N4TA0A589 114 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 NCAM2O15394 837 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 MT-CO1P00395 513 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 DLDP09622 509 aaKnown RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PRKCHP24723 683 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 IL12RB1P42701 662 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 NDST2P52849 883 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 YBEYP58557 167 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 ARF5P84085 180 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 SLC10A2Q12908 348 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 FZD5Q13467 585 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 SERINC3Q13530 473 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 DMC1Q14565 340 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 EIF4HQ15056 248 aaKnown RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PPP2R5EQ16537 467 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PTPRNQ16849 979 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PARP15Q460N3 678 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 DGKKQ5KSL6 1271 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 SLC9A4Q6AI14 798 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 SYT10Q6XYQ8 523 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 ZNF783Q6ZMS7 281 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 LZTR1Q8N653 840 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 DCAF4L2Q8NA75 395 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 IL17RCQ8NAC3 791 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 CCNYQ8ND76 341 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 USP33Q8TEY7 942 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 NELL2Q99435 816 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PRRX2Q99811 253 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 C2orf42Q9NWW7 574 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 DONSONQ9NYP3 566 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 SMARCAL1Q9NZC9 954 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 DTLQ9NZJ0 730 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 PLA2G4CQ9UP65 541 aa12.7□□□□□ -0.38
GABPB1-208ENST00000558970 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
GABPB1-208ENST00000558970 CKAP5Q14008 2032 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 F5P12259 2224 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 TTC34A8MYJ7 566 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 SGK1O00141 431 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 SMAD6O43541 496 aaKnown RBP12.69□□□□□ -0.38
GABPB1-208ENST00000558970 KDELR3O43731 214 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 EPHX1P07099 455 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 VAV1P15498 845 aa12.69□□□□□ -0.38
GABPB1-208ENST00000558970 AOC1P19801 751 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms