RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 FRS2Q8WU20 508 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 IFT43Q96FT9 208 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 SLC39A13Q96H72 371 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 BTN2A3PQ96KV6 586 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 TRIM62Q9BVG3 475 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 CFAP45Q9UL16 551 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 PPM1HQ9ULR3 514 aa18.33■□□□□ 0.52
TSPAN3-204ENST00000558394 K7ESM1 405 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 MCF2LO15068 1137 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 CETN3O15182 167 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 SART1O43290 800 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 RHOBTB3O94955 611 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 PAEPP09466 180 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 STILQ15468 1287 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 DLG2Q15700 870 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 TTC39BQ5VTQ0 682 aaPredicted RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 ZCCHC8Q6NZY4 707 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 TMEM270Q6UE05 265 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 RBM44Q6ZP01 1051 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 DCP2Q8IU60 420 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 CCAR2Q8N163 923 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 GUF1Q8N442 669 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 ATP6V0D2Q8N8Y2 350 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 TPCN2Q8NHX9 752 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 FAM174AQ8TBP5 190 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 ATXN7L3BQ96GX2 97 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 ARHGAP9Q9BRR9 750 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 TRIM4Q9C037 500 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 FZD3Q9NPG1 666 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 XPO7Q9UIA9 1087 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 NAALADL1Q9UQQ1 740 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 SSUH2Q9Y2M2 353 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 PCDHGA8Q9Y5G5 932 aa18.32■□□□□ 0.52
TSPAN3-204ENST00000558394 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 H3BM21 787 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 RIOK3O14730 519 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 NEBLO76041 1014 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 PCDH8O95206 1070 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 GIMD1P0DJR0 217 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 TGM2P21980 687 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 PLK1P53350 603 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 LRMPQ12912 555 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 ZNF177Q13360 481 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 CNGA2Q16280 664 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 CDKN3Q16667 212 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 EDRF1Q3B7T1 1238 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 ZC3H12AQ5D1E8 599 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 ZNF542PQ5EBM4 170 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 RABGAP1LQ5R372 815 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 Q6ZVU0 165 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 EFL1Q7Z2Z2 1120 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 PTAR1Q7Z6K3 402 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 TAC4Q86UU9 113 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 HORMAD1Q86X24 394 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 CCNL2Q96S94 520 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 ST7Q9NRC1 585 aa18.31■□□□□ 0.52
TSPAN3-204ENST00000558394 TCAF2A6NFQ2 919 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 A6NNZ2 444 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 KPNA3O00505 521 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 ATP9BO43861 1147 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 LZTS3O60299 673 aaPredicted RBP18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 GABBR2O75899 941 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 PFKFB1P16118 471 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 CLDN2P57739 230 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 TAS2R38P59533 333 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 ZNF284Q2VY69 593 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 CBWD6Q4V339 395 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 CBWD3Q5JTY5 395 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 CBWD5Q5RIA9 395 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 ATL3Q6DD88 541 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 Q6ZSR6 202 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 WDR36Q8NI36 951 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 TFAP2BQ92481 460 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 ARRDC3Q96B67 414 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 IPO11Q9UI26 975 aaKnown RBP18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 PCDHB4Q9Y5E5 795 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 ENTPD2Q9Y5L3 495 aa18.3■□□□□ 0.52
TSPAN3-204ENST00000558394 A0A1B0GVL5 298 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 TNFSF15O95150 251 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 FYNP06241 537 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 MLLT3P42568 568 aaPredicted RBP18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 VASPP50552 380 aaPredicted RBP18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 SKOR1P84550 965 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 PIP5KL1Q5T9C9 394 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 XKR5Q6UX68 686 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 ATG14Q6ZNE5 492 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 CIR1Q86X95 450 aaPredicted RBP18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 VPS28Q9UK41 221 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 COQ4Q9Y3A0 265 aa18.29■□□□□ 0.52
TSPAN3-204ENST00000558394 KIF26BQ2KJY2 2108 aa18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 LY6G6EA0A0G2JKS1 128 aa18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 CDRT15L2A8MXV6 281 aa18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 TCEA3O75764 348 aa18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 GJB6O95452 261 aa18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 BRD2P25440 801 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 MCCD1P59942 119 aaPredicted RBP18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 CLN3Q13286 438 aa18.28■□□□□ 0.52
TSPAN3-204ENST00000558394 NR0B2Q15466 257 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms