RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 LENG8Q96PV6 779 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SNX18Q96RF0 628 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 NUDCD1Q96RS6 583 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DPYSL5Q9BPU6 564 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GATA5Q9BWX5 397 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CXorf36Q9H7Y0 433 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 THAP1Q9NVV9 213 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CLIC5Q9NZA1 410 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 KIAA1456Q9P272 454 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 FNIP2Q9P278 1114 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC45A2Q9UMX9 530 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ADAMTS5Q9UNA0 930 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PPIEQ9UNP9 301 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 AGAP1Q9UPQ3 857 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 NRAPQ86VF7 1730 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TEX13CA0A0J9YWL9 993 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PGPEP1LA6NFU8 196 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZAR1LA6NP61 321 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CDRT15L2A8MXV6 281 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 E9PLN8 166 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 BUD23O43709 281 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 LPXNO60711 386 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 APOA4P06727 396 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 HNRNPA1P09651 372 aaKnown RBP eCLIP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ENO3P13929 434 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CHN1P15882 459 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 WT1P19544 449 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 RRM1P23921 792 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TACR3P29371 465 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 APOBEC3AP31941 199 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GJC1P36383 396 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GRIA3P42263 894 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CYP2J2P51589 502 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PLIN5Q00G26 463 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CYP4A11Q02928 519 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CUL4BQ13620 913 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 KRT32Q14532 448 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 RTP5Q14D33 572 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DUSP28Q4G0W2 176 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 AASDHQ4L235 1098 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 FAM69AQ5T7M9 428 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TCTN3Q6NUS6 607 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 NCEH1Q6PIU2 408 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 Q6ZSN1 163 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 B4GALNT4Q76KP1 1039 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC29A4Q7RTT9 530 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ELOA2Q8IYF1 753 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GHDCQ8N2G8 530 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 AMER2Q8N7J2 671 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MB21D1Q8N884 522 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 Q8TCH9 128 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 AFAP1L1Q8TED9 768 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 XAGE5Q8WWM1 108 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 HSPH1Q92598 858 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CNOT9Q92600 299 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CNDP2Q96KP4 475 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SEPT5Q99719 369 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 VKORC1Q9BQB6 163 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 STRA6Q9BX79 667 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 NUAK2Q9H093 628 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PARD6AQ9NPB6 346 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SAGE1Q9NXZ1 904 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DDX25Q9UHL0 483 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 HAO1Q9UJM8 370 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GPR34Q9UPC5 381 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CHST2Q9Y4C5 530 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 COPG1Q9Y678 874 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 RAPGEF6Q8TEU7 1601 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 FAT1Q14517 4588 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 LOC105369274A0A096LPK9 316 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 LOC102723532A0A0G2JNH3 316 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TYW5A2RUC4 315 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 A6NCN8 305 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 FAM90A20PA6NIJ5 464 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 C15orf62A8K5M9 175 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TMEM233B4DJY2 109 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 AKR1B15C9JRZ8 316 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 VILLO15195 856 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 YY2O15391 372 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 RNMTO43148 476 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 USO1O60763 962 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GCATO75600 419 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 NDUFA10O95299 355 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 EIF2S1P05198 315 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DRD1P21728 446 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MYF6P23409 242 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MCCP23508 829 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PSMA3P25788 255 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ATP5DP30049 168 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 HOXD12P35452 270 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 KRT2P35908 639 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MSH2P43246 934 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 RABGGTBP53611 331 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CDH8P55286 799 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GALNT1Q10472 559 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC10A2Q12908 348 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SF3B3Q15393 1217 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZNF124Q15973 351 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 BEAN1Q3B7T3 259 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZSCAN23Q3MJ62 389 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms