RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 GPR158Q5T848 1215 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 PPP1R21Q6ZMI0 780 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 GRASPQ7Z6J2 395 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 C12orf76Q8N812 135 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 PABPC5Q96DU9 382 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 DONSONQ9NYP3 566 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 UNC80Q8N2C7 3258 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 CCDC195A0A1B0GUA6 201 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 GOLGA6L10A6NI86 522 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 RFXAPO00287 272 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 PIAS1O75925 651 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 NRIP1P48552 1158 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 MAPKAPK2P49137 400 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 SLC7A9P82251 487 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 Q6ZNB5 142 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 MPP5Q8N3R9 675 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 MCUQ8NE86 351 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 SPATA22Q8NHS9 363 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 VAT1Q99536 393 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 IL12RB2Q99665 862 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 TRIM56Q9BRZ2 755 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 MLPHQ9BV36 600 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 SP110Q9HB58 689 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 TMBIM4Q9HC24 238 aa20.84■□□□□ 0.93
SNRPA1-205ENST00000558036 RBM22Q9NW64 420 aaKnown RBP eCLIP20.84■□□□□ 0.933e-9■■■■■ 38.6
SNRPA1-205ENST00000558036 HLA-DQB2P05538 268 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 EPHA5P54756 1037 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 CDH4P55283 916 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 SLC10A7Q0GE19 358 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 PARP15Q460N3 678 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 TIGD7Q6NT04 549 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 OR7D4Q8NG98 312 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 OXNAD1Q96HP4 312 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 TLE6Q9H808 572 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 STOML2Q9UJZ1 356 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 TEX264Q9Y6I9 313 aa20.83■□□□□ 0.93
SNRPA1-205ENST00000558036 MAGEA3P43357 314 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 CRADDP78560 199 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 SERINC3Q13530 473 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 ITPRIPL1Q6GPH6 555 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 PDE12Q6L8Q7 609 aaKnown RBP20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 BBS7Q8IWZ6 715 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 TTC25Q96NG3 672 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 PHACTR1Q9C0D0 580 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 MSRAQ9UJ68 235 aa20.83■□□□□ 0.92
SNRPA1-205ENST00000558036 GOLGA8KD6RF30 607 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 LEFTY2O00292 366 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 EIF3HO15372 352 aaKnown RBP eCLIP20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 ZNF189O75820 626 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 LRRC49Q8IUZ0 686 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 PALM2Q8IXS6 379 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 RIN3Q8TB24 985 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 ING5Q8WYH8 240 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 ARHGEF2Q92974 986 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 ZNF707Q96C28 371 aaPredicted RBP20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 APOL2Q9BQE5 337 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 SLC28A3Q9HAS3 691 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 SH3BP1Q9Y3L3 701 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 ACTL7AQ9Y615 435 aa20.82■□□□□ 0.92
SNRPA1-205ENST00000558036 A0A1B0GVM2 712 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 TCAF2A6NFQ2 919 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 TBL1XO60907 577 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 XYLBO75191 536 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 CLDN11O75508 207 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 MT-CYBP00156 380 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 HOXA9P31269 272 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 ETFBP38117 255 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 SESN2P58004 480 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 GNA12Q03113 381 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 CCDC38Q502W7 563 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 POTEHQ6S545 545 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 C3orf62Q6ZUJ4 267 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 CMTM8Q8IZV2 173 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 MAML1Q92585 1016 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 CFAP36Q96G28 342 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 PRKD2Q9BZL6 878 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 EIF2B3Q9NR50 452 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 CTNNAL1Q9UBT7 734 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 LSM7Q9UK45 103 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 GOLGA6CA6NDK9 693 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 RASGRF2O14827 1237 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 NEBLO76041 1014 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 HNRNPA1P09651 372 aaKnown RBP eCLIP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 GOLGA6DP0CG33 693 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 GLDCP23378 1020 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 AVPR1AP37288 418 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 YBEYP58557 167 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 MAXP61244 160 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 ZNF177Q13360 481 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 CBX2Q14781 532 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 DNAJC21Q5F1R6 531 aaKnown RBP20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 IL31Q6EBC2 164 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 TMC5Q6UXY8 1006 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 RTL10Q7L3V2 364 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 VN1R2Q8NFZ6 395 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 SH3RF2Q8TEC5 729 aa20.81■□□□□ 0.92
SNRPA1-205ENST00000558036 ATP6V1G3Q96LB4 118 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms