RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MARK4Q96L34 752 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 NAT9Q9BTE0 207 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 GATA5Q9BWX5 397 aaPredicted RBP18.07■□□□□ 0.48
XRCC3-218ENST00000557439 TKTL2Q9H0I9 626 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 DNAJC28Q9NX36 388 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 KLHL2O95198 593 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 MT-CYBP00156 380 aaPredicted RBP18.07■□□□□ 0.48
XRCC3-218ENST00000557439 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
XRCC3-218ENST00000557439 GRK2P25098 689 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 MPP3Q13368 585 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 TBCCQ15814 346 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 XKR4Q5GH76 650 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CFAP157Q5JU67 520 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 KCTD11Q693B1 232 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 IQSEC1Q6DN90 963 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 ZNF419Q96HQ0 510 aaPredicted RBP18.07■□□□□ 0.48
XRCC3-218ENST00000557439 VPS39Q96JC1 886 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 GAD1Q99259 594 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 SIK2Q9H0K1 926 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 C1orf21Q9H246 121 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CASS4Q9NQ75 786 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CDH22Q9UJ99 828 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 ADAMTS6Q9UKP5 1117 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CASTOR2A6NHX0 329 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 BUD23O43709 281 aaKnown RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 LRIG2O94898 1065 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 PPIDQ08752 370 aaKnown RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 CCL14Q16627 93 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 THEMIS2Q5TEJ8 643 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 TOP6BLQ8N6T0 577 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 TDRD5Q8NAT2 981 aaKnown RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 ECSITQ9BQ95 431 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 CDH19Q9H159 772 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 TSPYL2Q9H2G4 693 aaPredicted RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 EBF3Q9H4W6 596 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 S100A14Q9HCY8 104 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 OR12D3Q9UGF7 316 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 FBXW11Q9UKB1 542 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 PCDHB12Q9Y5F1 795 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 TTC3P53804 2025 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 XPOTO43592 962 aaKnown RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 JUNP05412 331 aaKnown RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 EPHA3P29320 983 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 ZNF467Q7Z7K2 595 aaPredicted RBP18.06■□□□□ 0.48
XRCC3-218ENST00000557439 CNTD1Q8N815 330 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 OR6Y1Q8NGX8 325 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 COLEC11Q9BWP8 271 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 NMRAL1Q9HBL8 299 aa18.06■□□□□ 0.48
XRCC3-218ENST00000557439 CCDC189A1A4V9 331 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 MAGEA12P43365 314 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 PSEN2P49810 448 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 ATXN3P54252 364 aaPredicted RBP18.05■□□□□ 0.48
XRCC3-218ENST00000557439 ADAM17P78536 824 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 INSCQ1MX18 579 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 TMEM198Q66K66 360 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 ISLR2Q6UXK2 745 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 HASPINQ8TF76 798 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 KCTD13Q8WZ19 329 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 GATA6Q92908 595 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 LENG8Q96PV6 779 aaPredicted RBP18.05■□□□□ 0.48
XRCC3-218ENST00000557439 PPP1R10Q96QC0 940 aaKnown RBP18.05■□□□□ 0.48
XRCC3-218ENST00000557439 PTPN18Q99952 460 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 GBA3Q9H227 469 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 TASP1Q9H6P5 420 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 GNEQ9Y223 722 aaKnown RBP18.05■□□□□ 0.48
XRCC3-218ENST00000557439 GABRDO14764 452 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 CTSHP09668 335 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 COX4I1P13073 169 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 DSG1Q02413 1049 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 ASPHQ12797 758 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 POU6F1Q14863 301 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 SFT2D3Q587I9 215 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 ZNF280DQ6N043 979 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 RWDD4Q6NW29 188 aaKnown RBP18.05■□□□□ 0.48
XRCC3-218ENST00000557439 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 DENND6AQ8IWF6 608 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 KCTD4Q8WVF5 259 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 TUBGCP5Q96RT8 1024 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 FTHL17Q9BXU8 183 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 ATXN3LQ9H3M9 355 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 WDCPQ9H6R7 721 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 CPA4Q9UI42 421 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 SCOCQ9UIL1 159 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 NUDT5Q9UKK9 219 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 POMPQ9Y244 141 aa18.05■□□□□ 0.48
XRCC3-218ENST00000557439 DFFAO00273 331 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 AIM2O14862 343 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 SBK3P0C264 359 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 ARSAP15289 507 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 ALOX15P16050 662 aaPredicted RBP18.04■□□□□ 0.48
XRCC3-218ENST00000557439 PEX2P28328 305 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 GABRB3P28472 473 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 NUMBP49757 651 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 MPP1Q00013 466 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 TBL3Q12788 808 aaKnown RBP18.04■□□□□ 0.48
XRCC3-218ENST00000557439 GRIK3Q13003 919 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 KLF10Q13118 480 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 CTBP1Q13363 440 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 NAB1Q13506 487 aa18.04■□□□□ 0.48
XRCC3-218ENST00000557439 CCDC153Q494R4 210 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms