RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	ADH1B	P00325	375 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	MT-CO1	P00395	513 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	IL1B	P01584	269 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ERBB2	P04626	1255 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	GLI1	P08151	1106 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PNMA6A	P0CW24	399 aa	Predicted RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PON1	P27169	355 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TAS2R38	P59533	333 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	DNAJC3	Q13217	504 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ELAVL3	Q14576	367 aa	Known RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ARHGAP44	Q17R89	818 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	C5orf22	Q49AR2	442 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PTPN20	Q4JDL3	420 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	AGBL4	Q5VU57	503 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SFMBT2	Q5VUG0	894 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	FAM183BP	Q6ZVS7	135 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ENOSF1	Q7L5Y1	443 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ADAT2	Q7Z6V5	191 aa	Known RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PDZD3	Q86UT5	571 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PASD1	Q8IV76	773 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ATP6V0D2	Q8N8Y2	350 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	OR14C36	Q8NHC7	312 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CRELD1	Q96HD1	420 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PPP1R13B	Q96KQ4	1090 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	BBC3	Q96PG8	261 aa	Predicted RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TRIM62	Q9BVG3	475 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ASNSD1	Q9NWL6	643 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	APEX2	Q9UBZ4	518 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PCDHGC3	Q9UN70	934 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SNX10	Q9Y5X0	201 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	HS3ST4	Q9Y661	456 aa		11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SETX	Q7Z333	2677 aa	Known RBP	11.49	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TLR4	O00206	839 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	FOXN3	O00409	490 aa	Predicted RBP	11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PAGE1	O75459	146 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CNTN5	O94779	1100 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	MOCS3	O95396	460 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	EPHA8	P29322	1005 aa	Predicted RBP	11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CCR1	P32246	355 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	RXRG	P48443	463 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ACADVL	P49748	655 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	C21orf59	P57076	290 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CDK17	Q00537	523 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CNTN1	Q12860	1018 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	DLG2	Q15700	870 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CCDC157	Q569K6	752 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	GALNT15	Q8N3T1	639 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	C1orf131	Q8NDD1	294 aa	Known RBP	11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	NT5C3B	Q969T7	300 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SERAC1	Q96JX3	654 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SPAG5	Q96R06	1193 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PSMB7	Q99436	277 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	FAM204A	Q9H8W3	233 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	AASDHPPT	Q9NRN7	309 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	COX16	Q9P0S2	106 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	FTSJ1	Q9UET6	329 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	RWDD2A	Q9UIY3	292 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	VANGL2	Q9ULK5	521 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CA5B	Q9Y2D0	317 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D30	Q9Y2I9	924 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CEP83	Q9Y592	693 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	GTF3C3	Q9Y5Q9	886 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	COL5A1	P20908	1838 aa	Predicted RBP	11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	DOCK9	Q9BZ29	2069 aa		11.48	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PTPRQ	Q9UMZ3	2332 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336		A0A087WV48	116 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3D	A0A087WVF3	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3I	A0A087WXS9	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3E	A0A087X179	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3K	A0A087X1G2	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3L	B9A6J9	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336		K7ERQ8	282 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ENC1	O14682	589 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	MCF2L	O15068	1137 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PLRG1	O43660	514 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	HSF2BP	O75031	334 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ADCY5	O95622	1261 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CTSL	P07711	333 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3H	P0C7X1	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	MAT2A	P31153	395 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	USP8	P40818	1118 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SULT2A1	Q06520	285 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SFSWAP	Q12872	951 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	POM121L1P	Q3SYA9	428 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ALF	Q53S48	1182 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	EFHC1	Q5JVL4	640 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	RABGAP1L	Q5R372	815 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	RNF219	Q5W0B1	726 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3G	Q6DHY5	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3C	Q6IPX1	549 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	NAPEPLD	Q6IQ20	393 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TRNP1	Q6NT89	227 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	GBP6	Q6ZN66	633 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms