RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZIM3Q96PE6 472 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF341Q9BYN7 854 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 PTGFRNQ9P2B2 879 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 B8ZZF3 427 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 CCNKO75909 580 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 F8A1P23610 371 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 GALCP54803 685 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 CNSTQ6PJW8 725 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 PCDHGB5Q9Y5G0 923 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 PCP4L1A6NKN8 68 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 H7C2Y5 167 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 TRIM3O75382 744 aaPredicted RBP8.96□□□□□ -0.97
SYNE3-205ENST00000557275 KCNMA1Q12791 1236 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 SPANXN3Q5MJ09 141 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 FATE1Q969F0 183 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 KRT33AO76009 404 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 RRM1P23921 792 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 FBXO39Q8N4B4 442 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 WDR24Q96S15 920 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PRMT7Q9NVM4 692 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PCDHA6Q9UN73 950 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PCDHA8Q9Y5H6 950 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 TSPAN4O14817 238 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF7P17097 686 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 CACNB3P54284 484 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 GLB1LQ6UWU2 654 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 CHST15Q7LFX5 561 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 C2orf69Q8N8R5 385 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 THRSPQ92748 146 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 HDAC2Q92769 488 aaKnown RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 BHLHE41Q9C0J9 482 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 LMAN2LQ9H0V9 348 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 TAS2R7Q9NYW3 318 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 MAN2B2Q9Y2E5 1009 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 LYVE1Q9Y5Y7 322 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 MGAT5Q09328 741 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 KCNA10Q16322 511 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 SLC45A4Q5BKX6 768 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 CBWD2Q8IUF1 395 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 OR2L5Q8NG80 312 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 LBHD1Q9BQE6 289 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 SP140LQ9H930 580 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 DOPEY2Q9Y3R5 2298 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PSIP1O75475 530 aaKnown RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 ITGA10O75578 1167 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PSMD5Q16401 504 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 GXYLT1Q4G148 440 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 DPF3Q92784 378 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 CD248Q9HCU0 757 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PRDM5Q9NQX1 630 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 SLC33A1O00400 549 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 SORBS3O60504 671 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 EIF2AK2P19525 551 aaKnown RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 ANKRD13AQ8IZ07 590 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF567Q8N184 647 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 LPCAT1Q8NF37 534 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 FEZF2Q8TBJ5 459 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 VAT1Q99536 393 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 SEPT5Q99719 369 aaPredicted RBP8.96□□□□□ -0.98
SYNE3-205ENST00000557275 DGCR6LQ9BY27 220 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 TRPS1Q9UHF7 1281 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 METP08581 1390 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 RFX3P48380 749 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 RGS7P49802 495 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 USP46P62068 366 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 USP41Q3LFD5 358 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 SNAP47Q5SQN1 464 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 DENND5BQ6ZUT9 1274 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 WDCPQ9H6R7 721 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 PEX16Q9Y5Y5 336 aa8.96□□□□□ -0.98
SYNE3-205ENST00000557275 MCIDASD6RGH6 385 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 RAD51CO43502 376 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 RXRBP28702 533 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SPIDRQ14159 915 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CYP2A13Q16696 494 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 C11orf63Q6NUN7 778 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF540Q8NDQ6 660 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 LPAR1Q92633 364 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 C9orf72Q96LT7 481 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 MTMR10Q9NXD2 777 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF639Q9UID6 485 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SNX6Q9UNH7 406 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PCDHGB1Q9Y5G3 927 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ERVV-1B6SEH8 477 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 OR7A10O76100 309 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PPIL2Q13356 520 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 DGCR6Q14129 220 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ELL3Q9HB65 397 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ZCCHC17Q9NP64 241 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 GMPPBQ9Y5P6 360 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 MYH13Q9UKX3 1938 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 S100A3P33764 101 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 GYG1P46976 350 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 BCAT1P54687 386 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TMC8Q8IU68 726 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 FMR1NBQ8N0W7 255 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 EXOC2Q96KP1 924 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PFDN5Q99471 154 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms