RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 KRT32Q14532 448 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 SF3A1Q15459 793 aaKnown RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 TBC1D25Q3MII6 688 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ZNF568Q3ZCX4 644 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ARHGAP40Q5TG30 622 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 BROXQ5VW32 411 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 E4F1Q66K89 784 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 SDE2Q6IQ49 451 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ERICH1Q86X53 443 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 CATSPER3Q86XQ3 398 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 DCP1BQ8IZD4 617 aaKnown RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 THEM5Q8N1Q8 247 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 FAM26EQ8N5C1 309 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ARL14EPQ8N8R7 260 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 FSIP1Q8NA03 581 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ZNF248Q8NDW4 579 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 OR10T2Q8NGX3 314 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 IPO4Q8TEX9 1081 aaKnown RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 KIFAP3Q92845 792 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 MRGPRX1Q96LB2 322 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 YIPF4Q9BSR8 244 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 MRPL4Q9BYD3 311 aaKnown RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ITM2CQ9NQX7 267 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 ARHGEF4Q9NR80 690 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 WSB2Q9NYS7 404 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 APEX2Q9UBZ4 518 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 TUBGCP4Q9UGJ1 667 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 KCNG1Q9UIX4 513 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 NAP1L2Q9ULW6 460 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 UBQLN1Q9UMX0 589 aaKnown RBP5.03□□□□□ -1.6
SCFD1-223ENST00000557076 BTBD3Q9Y2F9 522 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 TSC22D4Q9Y3Q8 395 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 PCDH15Q96QU1 1955 aa5.03□□□□□ -1.6
SCFD1-223ENST00000557076 SPTBN1Q01082 2364 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TLN1Q9Y490 2541 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 PTPRDP23468 1912 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 LEFTY2O00292 366 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 PIRO00625 290 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 PAPSS1O43252 624 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 SUV39H1O43463 412 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 XPOTO43592 962 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 BRINP1O60477 761 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TADA3O75528 432 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TOM1L1O75674 476 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 FSHBP01225 129 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 AFPP02771 609 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 CYP17A1P05093 508 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 CKMP06732 381 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 HOXB2P14652 356 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ZNF28P17035 718 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 OXTRP30559 389 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 GDF5P43026 501 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 NPTX2P47972 431 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 PPP3CCP48454 512 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ZNF132P52740 706 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TMPRSS3P57727 454 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 RPL10AP62906 217 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 SLC7A9P82251 487 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ATP2C1P98194 919 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 SSRP1Q08945 709 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 RESTQ13127 1097 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 NFE2Q16621 373 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 KYAT1Q16773 422 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 KIF19Q2TAC6 998 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ADCK5Q3MIX3 580 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ZC2HC1CQ53FD0 456 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 SPATA1Q5VX52 437 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 USP49Q70CQ1 688 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 METTL23Q86XA0 190 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TRIM59Q8IWR1 403 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 Q8N1Y9 231 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 IGSF8Q969P0 613 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 OTUB2Q96DC9 234 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TOE1Q96GM8 510 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 HIC2Q96JB3 615 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 CEP295NLQ96MC4 621 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ZNF578Q96N58 590 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 SORCS2Q96PQ0 1159 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 MTMR9Q96QG7 549 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 GABRG3Q99928 467 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 SYT3Q9BQG1 590 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 KIFC3Q9BVG8 833 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 NUP58Q9BVL2 599 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TARS2Q9BW92 718 aaKnown RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 AGXT2Q9BYV1 514 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 DPH1Q9BZG8 443 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 PCED1AQ9H1Q7 454 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TRPC7Q9HCX4 862 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TUFT1Q9NNX1 390 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 TBC1D14Q9P2M4 693 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ARHGAP28Q9P2N2 729 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 DEC1Q9P2X7 70 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 ST6GALNAC2Q9UJ37 374 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 MAGED2Q9UNF1 606 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-223ENST00000557076 PCDHB6Q9Y5E3 794 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 X6R8D5 127 aa5.02□□□□□ -1.61
SCFD1-223ENST00000557076 C2CD3Q4AC94 2353 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ADAMTS9Q9P2N4 1935 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 A0A1B0GVT2 93 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 E2F8A0AVK6 867 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms